Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15861 | 47806;47807;47808 | chr2:178617504;178617503;178617502 | chr2:179482231;179482230;179482229 |
N2AB | 14220 | 42883;42884;42885 | chr2:178617504;178617503;178617502 | chr2:179482231;179482230;179482229 |
N2A | 13293 | 40102;40103;40104 | chr2:178617504;178617503;178617502 | chr2:179482231;179482230;179482229 |
N2B | 6796 | 20611;20612;20613 | chr2:178617504;178617503;178617502 | chr2:179482231;179482230;179482229 |
Novex-1 | 6921 | 20986;20987;20988 | chr2:178617504;178617503;178617502 | chr2:179482231;179482230;179482229 |
Novex-2 | 6988 | 21187;21188;21189 | chr2:178617504;178617503;178617502 | chr2:179482231;179482230;179482229 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | rs2057561826 | None | 1.0 | D | 0.852 | 0.525 | 0.602958996521 | gnomAD-4.0.0 | 5.01201E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.79564E-06 | 0 | 0 |
S/N | rs2057561467 | None | 0.999 | D | 0.783 | 0.287 | 0.317958651998 | gnomAD-4.0.0 | 5.01315E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.79667E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1589 | likely_benign | 0.1904 | benign | -0.603 | Destabilizing | 0.998 | D | 0.701 | prob.neutral | None | None | None | None | N |
S/C | 0.251 | likely_benign | 0.2977 | benign | -0.571 | Destabilizing | 1.0 | D | 0.852 | deleterious | D | 0.67480621 | None | None | N |
S/D | 0.6976 | likely_pathogenic | 0.7121 | pathogenic | -1.112 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
S/E | 0.8498 | likely_pathogenic | 0.8373 | pathogenic | -1.064 | Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
S/F | 0.4182 | ambiguous | 0.452 | ambiguous | -0.608 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
S/G | 0.1196 | likely_benign | 0.1302 | benign | -0.904 | Destabilizing | 0.999 | D | 0.722 | prob.delet. | N | 0.49192899 | None | None | N |
S/H | 0.7708 | likely_pathogenic | 0.7503 | pathogenic | -1.454 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
S/I | 0.556 | ambiguous | 0.6624 | pathogenic | 0.105 | Stabilizing | 1.0 | D | 0.855 | deleterious | D | 0.674040026 | None | None | N |
S/K | 0.9644 | likely_pathogenic | 0.9615 | pathogenic | -0.875 | Destabilizing | 0.999 | D | 0.788 | deleterious | None | None | None | None | N |
S/L | 0.1727 | likely_benign | 0.2173 | benign | 0.105 | Stabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
S/M | 0.3719 | ambiguous | 0.4249 | ambiguous | 0.336 | Stabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
S/N | 0.4083 | ambiguous | 0.4616 | ambiguous | -1.065 | Destabilizing | 0.999 | D | 0.783 | deleterious | D | 0.569154511 | None | None | N |
S/P | 0.9004 | likely_pathogenic | 0.9178 | pathogenic | -0.095 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
S/Q | 0.8652 | likely_pathogenic | 0.8436 | pathogenic | -1.14 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
S/R | 0.9505 | likely_pathogenic | 0.9504 | pathogenic | -0.857 | Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.633731468 | None | None | N |
S/T | 0.1553 | likely_benign | 0.1987 | benign | -0.889 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | D | 0.532521139 | None | None | N |
S/V | 0.5178 | ambiguous | 0.6096 | pathogenic | -0.095 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
S/W | 0.6948 | likely_pathogenic | 0.7023 | pathogenic | -0.716 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
S/Y | 0.4414 | ambiguous | 0.4544 | ambiguous | -0.397 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.