Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15864 | 47815;47816;47817 | chr2:178617495;178617494;178617493 | chr2:179482222;179482221;179482220 |
N2AB | 14223 | 42892;42893;42894 | chr2:178617495;178617494;178617493 | chr2:179482222;179482221;179482220 |
N2A | 13296 | 40111;40112;40113 | chr2:178617495;178617494;178617493 | chr2:179482222;179482221;179482220 |
N2B | 6799 | 20620;20621;20622 | chr2:178617495;178617494;178617493 | chr2:179482222;179482221;179482220 |
Novex-1 | 6924 | 20995;20996;20997 | chr2:178617495;178617494;178617493 | chr2:179482222;179482221;179482220 |
Novex-2 | 6991 | 21196;21197;21198 | chr2:178617495;178617494;178617493 | chr2:179482222;179482221;179482220 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1553709304 | None | None | N | 0.116 | 0.039 | 0.156986980423 | gnomAD-4.0.0 | 1.65486E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.91596E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.158 | likely_benign | 0.1849 | benign | -1.556 | Destabilizing | 0.081 | N | 0.327 | neutral | N | 0.448005181 | None | None | N |
V/C | 0.5483 | ambiguous | 0.6249 | pathogenic | -0.916 | Destabilizing | 0.859 | D | 0.561 | neutral | None | None | None | None | N |
V/D | 0.3853 | ambiguous | 0.424 | ambiguous | -1.642 | Destabilizing | 0.22 | N | 0.648 | neutral | None | None | None | None | N |
V/E | 0.2434 | likely_benign | 0.2471 | benign | -1.653 | Destabilizing | 0.096 | N | 0.589 | neutral | N | 0.424778467 | None | None | N |
V/F | 0.1378 | likely_benign | 0.1877 | benign | -1.219 | Destabilizing | 0.497 | N | 0.614 | neutral | None | None | None | None | N |
V/G | 0.1686 | likely_benign | 0.1932 | benign | -1.865 | Destabilizing | 0.301 | N | 0.596 | neutral | N | 0.435049012 | None | None | N |
V/H | 0.4454 | ambiguous | 0.5158 | ambiguous | -1.492 | Destabilizing | 0.883 | D | 0.592 | neutral | None | None | None | None | N |
V/I | 0.0649 | likely_benign | 0.0753 | benign | -0.804 | Destabilizing | None | N | 0.116 | neutral | N | 0.439889809 | None | None | N |
V/K | 0.2405 | likely_benign | 0.2521 | benign | -1.423 | Destabilizing | 0.124 | N | 0.585 | neutral | None | None | None | None | N |
V/L | 0.0982 | likely_benign | 0.1243 | benign | -0.804 | Destabilizing | None | N | 0.139 | neutral | N | 0.396407843 | None | None | N |
V/M | 0.1046 | likely_benign | 0.1298 | benign | -0.52 | Destabilizing | 0.497 | N | 0.527 | neutral | None | None | None | None | N |
V/N | 0.211 | likely_benign | 0.25 | benign | -1.14 | Destabilizing | 0.667 | D | 0.641 | neutral | None | None | None | None | N |
V/P | 0.7076 | likely_pathogenic | 0.7337 | pathogenic | -1.021 | Destabilizing | 0.859 | D | 0.635 | neutral | None | None | None | None | N |
V/Q | 0.2171 | likely_benign | 0.2197 | benign | -1.336 | Destabilizing | 0.011 | N | 0.458 | neutral | None | None | None | None | N |
V/R | 0.1947 | likely_benign | 0.2047 | benign | -0.848 | Destabilizing | 0.497 | N | 0.645 | neutral | None | None | None | None | N |
V/S | 0.1768 | likely_benign | 0.2012 | benign | -1.586 | Destabilizing | 0.124 | N | 0.555 | neutral | None | None | None | None | N |
V/T | 0.1468 | likely_benign | 0.1546 | benign | -1.501 | Destabilizing | 0.004 | N | 0.16 | neutral | None | None | None | None | N |
V/W | 0.6623 | likely_pathogenic | 0.7624 | pathogenic | -1.434 | Destabilizing | 0.958 | D | 0.615 | neutral | None | None | None | None | N |
V/Y | 0.3983 | ambiguous | 0.4878 | ambiguous | -1.178 | Destabilizing | 0.667 | D | 0.609 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.