Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15865 | 47818;47819;47820 | chr2:178617492;178617491;178617490 | chr2:179482219;179482218;179482217 |
N2AB | 14224 | 42895;42896;42897 | chr2:178617492;178617491;178617490 | chr2:179482219;179482218;179482217 |
N2A | 13297 | 40114;40115;40116 | chr2:178617492;178617491;178617490 | chr2:179482219;179482218;179482217 |
N2B | 6800 | 20623;20624;20625 | chr2:178617492;178617491;178617490 | chr2:179482219;179482218;179482217 |
Novex-1 | 6925 | 20998;20999;21000 | chr2:178617492;178617491;178617490 | chr2:179482219;179482218;179482217 |
Novex-2 | 6992 | 21199;21200;21201 | chr2:178617492;178617491;178617490 | chr2:179482219;179482218;179482217 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs2057560011 | None | 0.994 | N | 0.451 | 0.288 | 0.243398259712 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 1.88253E-04 | 0 | 0 | 0 | 0 |
N/S | rs2057560011 | None | 0.994 | N | 0.451 | 0.288 | 0.243398259712 | gnomAD-4.0.0 | 1.31725E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.88253E-04 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3032 | likely_benign | 0.3487 | ambiguous | -0.209 | Destabilizing | 0.992 | D | 0.563 | neutral | None | None | None | None | I |
N/C | 0.3445 | ambiguous | 0.3842 | ambiguous | 0.256 | Stabilizing | 0.46 | N | 0.443 | neutral | None | None | None | None | I |
N/D | 0.1994 | likely_benign | 0.2469 | benign | 0.124 | Stabilizing | 0.998 | D | 0.517 | neutral | N | 0.489198181 | None | None | I |
N/E | 0.4744 | ambiguous | 0.5424 | ambiguous | 0.088 | Stabilizing | 1.0 | D | 0.585 | neutral | None | None | None | None | I |
N/F | 0.5102 | ambiguous | 0.5804 | pathogenic | -0.591 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
N/G | 0.3234 | likely_benign | 0.375 | ambiguous | -0.375 | Destabilizing | 0.996 | D | 0.461 | neutral | None | None | None | None | I |
N/H | 0.1445 | likely_benign | 0.1522 | benign | -0.381 | Destabilizing | 0.999 | D | 0.595 | neutral | D | 0.539495373 | None | None | I |
N/I | 0.3375 | likely_benign | 0.4123 | ambiguous | 0.137 | Stabilizing | 0.998 | D | 0.756 | deleterious | D | 0.569314579 | None | None | I |
N/K | 0.3459 | ambiguous | 0.4039 | ambiguous | 0.072 | Stabilizing | 0.999 | D | 0.59 | neutral | N | 0.491959431 | None | None | I |
N/L | 0.3107 | likely_benign | 0.3595 | ambiguous | 0.137 | Stabilizing | 0.998 | D | 0.649 | neutral | None | None | None | None | I |
N/M | 0.4256 | ambiguous | 0.4892 | ambiguous | 0.306 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
N/P | 0.8129 | likely_pathogenic | 0.86 | pathogenic | 0.048 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
N/Q | 0.3952 | ambiguous | 0.4241 | ambiguous | -0.381 | Destabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | I |
N/R | 0.3823 | ambiguous | 0.3979 | ambiguous | 0.113 | Stabilizing | 1.0 | D | 0.614 | neutral | None | None | None | None | I |
N/S | 0.1189 | likely_benign | 0.1304 | benign | -0.154 | Destabilizing | 0.994 | D | 0.451 | neutral | N | 0.489965576 | None | None | I |
N/T | 0.2166 | likely_benign | 0.2505 | benign | -0.052 | Destabilizing | 0.994 | D | 0.552 | neutral | N | 0.521680427 | None | None | I |
N/V | 0.3669 | ambiguous | 0.4247 | ambiguous | 0.048 | Stabilizing | 0.998 | D | 0.726 | prob.delet. | None | None | None | None | I |
N/W | 0.8101 | likely_pathogenic | 0.8332 | pathogenic | -0.617 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
N/Y | 0.1962 | likely_benign | 0.2199 | benign | -0.334 | Destabilizing | 0.999 | D | 0.753 | deleterious | D | 0.694911738 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.