Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15868 | 47827;47828;47829 | chr2:178617483;178617482;178617481 | chr2:179482210;179482209;179482208 |
N2AB | 14227 | 42904;42905;42906 | chr2:178617483;178617482;178617481 | chr2:179482210;179482209;179482208 |
N2A | 13300 | 40123;40124;40125 | chr2:178617483;178617482;178617481 | chr2:179482210;179482209;179482208 |
N2B | 6803 | 20632;20633;20634 | chr2:178617483;178617482;178617481 | chr2:179482210;179482209;179482208 |
Novex-1 | 6928 | 21007;21008;21009 | chr2:178617483;178617482;178617481 | chr2:179482210;179482209;179482208 |
Novex-2 | 6995 | 21208;21209;21210 | chr2:178617483;178617482;178617481 | chr2:179482210;179482209;179482208 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/Y | None | None | None | N | 0.381 | 0.067 | 0.340273420219 | gnomAD-4.0.0 | 2.0808E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.71182E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0652 | likely_benign | 0.0658 | benign | -0.565 | Destabilizing | None | N | 0.119 | neutral | N | 0.313911399 | None | None | N |
S/C | 0.0783 | likely_benign | 0.0784 | benign | -0.479 | Destabilizing | 0.295 | N | 0.533 | neutral | N | 0.422000009 | None | None | N |
S/D | 0.3468 | ambiguous | 0.4307 | ambiguous | 0.374 | Stabilizing | 0.072 | N | 0.455 | neutral | None | None | None | None | N |
S/E | 0.4241 | ambiguous | 0.4891 | ambiguous | 0.38 | Stabilizing | 0.031 | N | 0.426 | neutral | None | None | None | None | N |
S/F | 0.1169 | likely_benign | 0.1412 | benign | -0.886 | Destabilizing | 0.029 | N | 0.501 | neutral | N | 0.392885555 | None | None | N |
S/G | 0.1155 | likely_benign | 0.1273 | benign | -0.798 | Destabilizing | 0.007 | N | 0.335 | neutral | None | None | None | None | N |
S/H | 0.1697 | likely_benign | 0.191 | benign | -1.219 | Destabilizing | None | N | 0.244 | neutral | None | None | None | None | N |
S/I | 0.1146 | likely_benign | 0.1342 | benign | -0.059 | Destabilizing | 0.072 | N | 0.56 | neutral | None | None | None | None | N |
S/K | 0.504 | ambiguous | 0.6048 | pathogenic | -0.352 | Destabilizing | 0.031 | N | 0.435 | neutral | None | None | None | None | N |
S/L | 0.1214 | likely_benign | 0.1469 | benign | -0.059 | Destabilizing | 0.016 | N | 0.377 | neutral | None | None | None | None | N |
S/M | 0.2103 | likely_benign | 0.2402 | benign | -0.031 | Destabilizing | 0.356 | N | 0.523 | neutral | None | None | None | None | N |
S/N | 0.1551 | likely_benign | 0.1925 | benign | -0.401 | Destabilizing | 0.072 | N | 0.462 | neutral | None | None | None | None | N |
S/P | 0.131 | likely_benign | 0.1399 | benign | -0.194 | Destabilizing | 0.055 | N | 0.566 | neutral | N | 0.450841314 | None | None | N |
S/Q | 0.3704 | ambiguous | 0.4202 | ambiguous | -0.439 | Destabilizing | 0.072 | N | 0.477 | neutral | None | None | None | None | N |
S/R | 0.4245 | ambiguous | 0.501 | ambiguous | -0.372 | Destabilizing | 0.072 | N | 0.5 | neutral | None | None | None | None | N |
S/T | 0.0968 | likely_benign | 0.105 | benign | -0.435 | Destabilizing | 0.012 | N | 0.415 | neutral | N | 0.450472985 | None | None | N |
S/V | 0.1175 | likely_benign | 0.1293 | benign | -0.194 | Destabilizing | 0.016 | N | 0.417 | neutral | None | None | None | None | N |
S/W | 0.1775 | likely_benign | 0.2102 | benign | -0.892 | Destabilizing | None | N | 0.433 | neutral | None | None | None | None | N |
S/Y | 0.0832 | likely_benign | 0.0955 | benign | -0.572 | Destabilizing | None | N | 0.381 | neutral | N | 0.419436645 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.