Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15875 | 47848;47849;47850 | chr2:178617462;178617461;178617460 | chr2:179482189;179482188;179482187 |
N2AB | 14234 | 42925;42926;42927 | chr2:178617462;178617461;178617460 | chr2:179482189;179482188;179482187 |
N2A | 13307 | 40144;40145;40146 | chr2:178617462;178617461;178617460 | chr2:179482189;179482188;179482187 |
N2B | 6810 | 20653;20654;20655 | chr2:178617462;178617461;178617460 | chr2:179482189;179482188;179482187 |
Novex-1 | 6935 | 21028;21029;21030 | chr2:178617462;178617461;178617460 | chr2:179482189;179482188;179482187 |
Novex-2 | 7002 | 21229;21230;21231 | chr2:178617462;178617461;178617460 | chr2:179482189;179482188;179482187 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs1274510932 | None | 1.0 | D | 0.81 | 0.536 | 0.569101917167 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1182 | likely_benign | 0.1451 | benign | -0.37 | Destabilizing | 0.997 | D | 0.496 | neutral | N | 0.51753329 | None | None | N |
S/C | 0.1743 | likely_benign | 0.1814 | benign | -0.876 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
S/D | 0.6135 | likely_pathogenic | 0.7068 | pathogenic | -1.946 | Destabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | N |
S/E | 0.6405 | likely_pathogenic | 0.6916 | pathogenic | -1.903 | Destabilizing | 0.999 | D | 0.606 | neutral | None | None | None | None | N |
S/F | 0.2588 | likely_benign | 0.3155 | benign | -0.842 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
S/G | 0.2058 | likely_benign | 0.2361 | benign | -0.586 | Destabilizing | 0.999 | D | 0.539 | neutral | None | None | None | None | N |
S/H | 0.4783 | ambiguous | 0.4861 | ambiguous | -1.152 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
S/I | 0.3985 | ambiguous | 0.4667 | ambiguous | 0.1 | Stabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
S/K | 0.8625 | likely_pathogenic | 0.8801 | pathogenic | -0.62 | Destabilizing | 0.999 | D | 0.613 | neutral | None | None | None | None | N |
S/L | 0.1922 | likely_benign | 0.2267 | benign | 0.1 | Stabilizing | 1.0 | D | 0.755 | deleterious | D | 0.679342829 | None | None | N |
S/M | 0.2907 | likely_benign | 0.3461 | ambiguous | 0.292 | Stabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
S/N | 0.3112 | likely_benign | 0.3738 | ambiguous | -1.115 | Destabilizing | 0.999 | D | 0.618 | neutral | None | None | None | None | N |
S/P | 0.9745 | likely_pathogenic | 0.9826 | pathogenic | -0.025 | Destabilizing | 1.0 | D | 0.81 | deleterious | D | 0.71688786 | None | None | N |
S/Q | 0.6946 | likely_pathogenic | 0.7187 | pathogenic | -1.332 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
S/R | 0.7947 | likely_pathogenic | 0.8158 | pathogenic | -0.473 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
S/T | 0.0857 | likely_benign | 0.0968 | benign | -0.803 | Destabilizing | 0.999 | D | 0.542 | neutral | N | 0.48522611 | None | None | N |
S/V | 0.3358 | likely_benign | 0.3963 | ambiguous | -0.025 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
S/W | 0.4967 | ambiguous | 0.533 | ambiguous | -1.024 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
S/Y | 0.2584 | likely_benign | 0.3023 | benign | -0.574 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.