Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15876 | 47851;47852;47853 | chr2:178617459;178617458;178617457 | chr2:179482186;179482185;179482184 |
N2AB | 14235 | 42928;42929;42930 | chr2:178617459;178617458;178617457 | chr2:179482186;179482185;179482184 |
N2A | 13308 | 40147;40148;40149 | chr2:178617459;178617458;178617457 | chr2:179482186;179482185;179482184 |
N2B | 6811 | 20656;20657;20658 | chr2:178617459;178617458;178617457 | chr2:179482186;179482185;179482184 |
Novex-1 | 6936 | 21031;21032;21033 | chr2:178617459;178617458;178617457 | chr2:179482186;179482185;179482184 |
Novex-2 | 7003 | 21232;21233;21234 | chr2:178617459;178617458;178617457 | chr2:179482186;179482185;179482184 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.999 | D | 0.824 | 0.395 | 0.64127314462 | gnomAD-4.0.0 | 6.91052E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02897E-07 | 0 | 0 |
V/I | rs766025438 | -0.98 | 0.973 | N | 0.536 | 0.236 | 0.389750110748 | gnomAD-2.1.1 | 4.33E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.37E-06 | 0 |
V/I | rs766025438 | -0.98 | 0.973 | N | 0.536 | 0.236 | 0.389750110748 | gnomAD-4.0.0 | 1.65852E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.16695E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3613 | ambiguous | 0.4332 | ambiguous | -2.472 | Highly Destabilizing | 0.948 | D | 0.62 | neutral | N | 0.481192689 | None | None | N |
V/C | 0.734 | likely_pathogenic | 0.766 | pathogenic | -2.713 | Highly Destabilizing | 0.296 | N | 0.472 | neutral | None | None | None | None | N |
V/D | 0.9191 | likely_pathogenic | 0.95 | pathogenic | -3.344 | Highly Destabilizing | 0.999 | D | 0.856 | deleterious | D | 0.716024008 | None | None | N |
V/E | 0.8378 | likely_pathogenic | 0.8879 | pathogenic | -3.111 | Highly Destabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | N |
V/F | 0.3364 | likely_benign | 0.3991 | ambiguous | -1.6 | Destabilizing | 0.999 | D | 0.824 | deleterious | D | 0.595895062 | None | None | N |
V/G | 0.5431 | ambiguous | 0.6187 | pathogenic | -3.004 | Highly Destabilizing | 0.997 | D | 0.847 | deleterious | D | 0.676847475 | None | None | N |
V/H | 0.9064 | likely_pathogenic | 0.9393 | pathogenic | -2.619 | Highly Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
V/I | 0.0771 | likely_benign | 0.0844 | benign | -0.969 | Destabilizing | 0.973 | D | 0.536 | neutral | N | 0.457856344 | None | None | N |
V/K | 0.8766 | likely_pathogenic | 0.9164 | pathogenic | -2.111 | Highly Destabilizing | 0.999 | D | 0.859 | deleterious | None | None | None | None | N |
V/L | 0.2638 | likely_benign | 0.3134 | benign | -0.969 | Destabilizing | 0.948 | D | 0.623 | neutral | N | 0.470919028 | None | None | N |
V/M | 0.2643 | likely_benign | 0.3109 | benign | -1.425 | Destabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | N |
V/N | 0.7582 | likely_pathogenic | 0.8362 | pathogenic | -2.602 | Highly Destabilizing | 0.999 | D | 0.881 | deleterious | None | None | None | None | N |
V/P | 0.98 | likely_pathogenic | 0.9854 | pathogenic | -1.447 | Destabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | N |
V/Q | 0.7885 | likely_pathogenic | 0.8395 | pathogenic | -2.443 | Highly Destabilizing | 0.999 | D | 0.877 | deleterious | None | None | None | None | N |
V/R | 0.7949 | likely_pathogenic | 0.8454 | pathogenic | -1.899 | Destabilizing | 0.999 | D | 0.884 | deleterious | None | None | None | None | N |
V/S | 0.5562 | ambiguous | 0.6471 | pathogenic | -3.228 | Highly Destabilizing | 0.998 | D | 0.826 | deleterious | None | None | None | None | N |
V/T | 0.4062 | ambiguous | 0.4924 | ambiguous | -2.843 | Highly Destabilizing | 0.992 | D | 0.684 | prob.neutral | None | None | None | None | N |
V/W | 0.9544 | likely_pathogenic | 0.9693 | pathogenic | -2.022 | Highly Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
V/Y | 0.8223 | likely_pathogenic | 0.8701 | pathogenic | -1.725 | Destabilizing | 0.999 | D | 0.83 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.