Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15879 | 47860;47861;47862 | chr2:178617450;178617449;178617448 | chr2:179482177;179482176;179482175 |
N2AB | 14238 | 42937;42938;42939 | chr2:178617450;178617449;178617448 | chr2:179482177;179482176;179482175 |
N2A | 13311 | 40156;40157;40158 | chr2:178617450;178617449;178617448 | chr2:179482177;179482176;179482175 |
N2B | 6814 | 20665;20666;20667 | chr2:178617450;178617449;178617448 | chr2:179482177;179482176;179482175 |
Novex-1 | 6939 | 21040;21041;21042 | chr2:178617450;178617449;178617448 | chr2:179482177;179482176;179482175 |
Novex-2 | 7006 | 21241;21242;21243 | chr2:178617450;178617449;178617448 | chr2:179482177;179482176;179482175 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs2057553844 | None | 0.065 | N | 0.307 | 0.047 | 0.154104182512 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/Q | rs2057553844 | None | 0.065 | N | 0.307 | 0.047 | 0.154104182512 | gnomAD-4.0.0 | 6.58345E-06 | None | None | None | None | I | None | 2.41488E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1374 | likely_benign | 0.1562 | benign | -0.95 | Destabilizing | 0.002 | N | 0.263 | neutral | None | None | None | None | I |
K/C | 0.3881 | ambiguous | 0.4131 | ambiguous | -0.99 | Destabilizing | 0.245 | N | 0.537 | neutral | None | None | None | None | I |
K/D | 0.3617 | ambiguous | 0.4346 | ambiguous | -0.798 | Destabilizing | 0.018 | N | 0.361 | neutral | None | None | None | None | I |
K/E | 0.1275 | likely_benign | 0.1515 | benign | -0.585 | Destabilizing | 0.006 | N | 0.269 | neutral | N | 0.464221274 | None | None | I |
K/F | 0.3873 | ambiguous | 0.4985 | ambiguous | -0.322 | Destabilizing | 0.085 | N | 0.549 | neutral | None | None | None | None | I |
K/G | 0.2667 | likely_benign | 0.3224 | benign | -1.409 | Destabilizing | 0.004 | N | 0.372 | neutral | None | None | None | None | I |
K/H | 0.168 | likely_benign | 0.1948 | benign | -1.664 | Destabilizing | 0.497 | N | 0.465 | neutral | None | None | None | None | I |
K/I | 0.1217 | likely_benign | 0.1556 | benign | 0.301 | Stabilizing | None | N | 0.432 | neutral | N | 0.481625202 | None | None | I |
K/L | 0.145 | likely_benign | 0.1928 | benign | 0.301 | Stabilizing | 0.002 | N | 0.385 | neutral | None | None | None | None | I |
K/M | 0.0879 | likely_benign | 0.1024 | benign | 0.079 | Stabilizing | 0.245 | N | 0.52 | neutral | None | None | None | None | I |
K/N | 0.1655 | likely_benign | 0.2188 | benign | -1.131 | Destabilizing | 0.014 | N | 0.266 | neutral | N | 0.479222097 | None | None | I |
K/P | 0.8706 | likely_pathogenic | 0.9128 | pathogenic | -0.088 | Destabilizing | 0.037 | N | 0.369 | neutral | None | None | None | None | I |
K/Q | 0.087 | likely_benign | 0.0978 | benign | -0.979 | Destabilizing | 0.065 | N | 0.307 | neutral | N | 0.463362112 | None | None | I |
K/R | 0.0813 | likely_benign | 0.0885 | benign | -0.922 | Destabilizing | 0.014 | N | 0.339 | neutral | N | 0.468452861 | None | None | I |
K/S | 0.1364 | likely_benign | 0.1618 | benign | -1.757 | Destabilizing | None | N | 0.1 | neutral | None | None | None | None | I |
K/T | 0.0492 | likely_benign | 0.0546 | benign | -1.3 | Destabilizing | None | N | 0.204 | neutral | N | 0.370868746 | None | None | I |
K/V | 0.1399 | likely_benign | 0.1694 | benign | -0.088 | Destabilizing | 0.002 | N | 0.386 | neutral | None | None | None | None | I |
K/W | 0.5329 | ambiguous | 0.6129 | pathogenic | -0.277 | Destabilizing | 0.788 | D | 0.553 | neutral | None | None | None | None | I |
K/Y | 0.3333 | likely_benign | 0.4059 | ambiguous | 0.044 | Stabilizing | 0.085 | N | 0.585 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.