Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15881 | 47866;47867;47868 | chr2:178617444;178617443;178617442 | chr2:179482171;179482170;179482169 |
N2AB | 14240 | 42943;42944;42945 | chr2:178617444;178617443;178617442 | chr2:179482171;179482170;179482169 |
N2A | 13313 | 40162;40163;40164 | chr2:178617444;178617443;178617442 | chr2:179482171;179482170;179482169 |
N2B | 6816 | 20671;20672;20673 | chr2:178617444;178617443;178617442 | chr2:179482171;179482170;179482169 |
Novex-1 | 6941 | 21046;21047;21048 | chr2:178617444;178617443;178617442 | chr2:179482171;179482170;179482169 |
Novex-2 | 7008 | 21247;21248;21249 | chr2:178617444;178617443;178617442 | chr2:179482171;179482170;179482169 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1437852479 | None | 0.999 | N | 0.567 | 0.425 | 0.29527378943 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | I | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1437852479 | None | 0.999 | N | 0.567 | 0.425 | 0.29527378943 | gnomAD-4.0.0 | 6.58718E-06 | None | None | None | None | I | None | 2.41815E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2328 | likely_benign | 0.2618 | benign | -0.815 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | N | 0.479721929 | None | None | I |
E/C | 0.866 | likely_pathogenic | 0.8841 | pathogenic | -0.566 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | I |
E/D | 0.1701 | likely_benign | 0.2168 | benign | -1.005 | Destabilizing | 0.999 | D | 0.463 | neutral | N | 0.483932486 | None | None | I |
E/F | 0.786 | likely_pathogenic | 0.8181 | pathogenic | -0.219 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | I |
E/G | 0.2234 | likely_benign | 0.2555 | benign | -1.16 | Destabilizing | 1.0 | D | 0.747 | deleterious | N | 0.471705947 | None | None | I |
E/H | 0.5913 | likely_pathogenic | 0.6429 | pathogenic | -0.387 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
E/I | 0.4289 | ambiguous | 0.4738 | ambiguous | 0.125 | Stabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | I |
E/K | 0.2509 | likely_benign | 0.2928 | benign | -0.772 | Destabilizing | 0.999 | D | 0.567 | neutral | N | 0.474175948 | None | None | I |
E/L | 0.4316 | ambiguous | 0.5006 | ambiguous | 0.125 | Stabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
E/M | 0.4805 | ambiguous | 0.519 | ambiguous | 0.427 | Stabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
E/N | 0.2945 | likely_benign | 0.3707 | ambiguous | -1.17 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | I |
E/P | 0.9706 | likely_pathogenic | 0.9693 | pathogenic | -0.167 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
E/Q | 0.1826 | likely_benign | 0.1958 | benign | -1.029 | Destabilizing | 1.0 | D | 0.621 | neutral | N | 0.483932486 | None | None | I |
E/R | 0.4362 | ambiguous | 0.4555 | ambiguous | -0.387 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | I |
E/S | 0.2632 | likely_benign | 0.302 | benign | -1.458 | Destabilizing | 0.999 | D | 0.636 | neutral | None | None | None | None | I |
E/T | 0.2974 | likely_benign | 0.3262 | benign | -1.18 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
E/V | 0.2885 | likely_benign | 0.3133 | benign | -0.167 | Destabilizing | 1.0 | D | 0.783 | deleterious | N | 0.479646859 | None | None | I |
E/W | 0.9342 | likely_pathogenic | 0.9408 | pathogenic | 0.017 | Stabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
E/Y | 0.6863 | likely_pathogenic | 0.7288 | pathogenic | 0.001 | Stabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.