Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15886 | 47881;47882;47883 | chr2:178617429;178617428;178617427 | chr2:179482156;179482155;179482154 |
N2AB | 14245 | 42958;42959;42960 | chr2:178617429;178617428;178617427 | chr2:179482156;179482155;179482154 |
N2A | 13318 | 40177;40178;40179 | chr2:178617429;178617428;178617427 | chr2:179482156;179482155;179482154 |
N2B | 6821 | 20686;20687;20688 | chr2:178617429;178617428;178617427 | chr2:179482156;179482155;179482154 |
Novex-1 | 6946 | 21061;21062;21063 | chr2:178617429;178617428;178617427 | chr2:179482156;179482155;179482154 |
Novex-2 | 7013 | 21262;21263;21264 | chr2:178617429;178617428;178617427 | chr2:179482156;179482155;179482154 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs1451730427 | -0.651 | 0.91 | D | 0.493 | 0.263 | 0.454054078574 | gnomAD-2.1.1 | 4.43E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.54E-06 | 0 |
D/E | rs1451730427 | -0.651 | 0.91 | D | 0.493 | 0.263 | 0.454054078574 | gnomAD-4.0.0 | 1.64171E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.90688E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6823 | likely_pathogenic | 0.8109 | pathogenic | -0.507 | Destabilizing | 0.98 | D | 0.663 | neutral | D | 0.565737561 | None | None | I |
D/C | 0.9338 | likely_pathogenic | 0.9651 | pathogenic | -0.047 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
D/E | 0.7091 | likely_pathogenic | 0.8266 | pathogenic | -0.641 | Destabilizing | 0.91 | D | 0.493 | neutral | D | 0.550334045 | None | None | I |
D/F | 0.9438 | likely_pathogenic | 0.9715 | pathogenic | -0.574 | Destabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | I |
D/G | 0.589 | likely_pathogenic | 0.7216 | pathogenic | -0.783 | Destabilizing | 0.961 | D | 0.569 | neutral | D | 0.620918012 | None | None | I |
D/H | 0.8182 | likely_pathogenic | 0.875 | pathogenic | -0.942 | Destabilizing | 0.994 | D | 0.688 | prob.neutral | D | 0.635946004 | None | None | I |
D/I | 0.8842 | likely_pathogenic | 0.9504 | pathogenic | 0.197 | Stabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | I |
D/K | 0.9128 | likely_pathogenic | 0.9553 | pathogenic | -0.135 | Destabilizing | 0.97 | D | 0.593 | neutral | None | None | None | None | I |
D/L | 0.8776 | likely_pathogenic | 0.9412 | pathogenic | 0.197 | Stabilizing | 0.996 | D | 0.743 | deleterious | None | None | None | None | I |
D/M | 0.9464 | likely_pathogenic | 0.9756 | pathogenic | 0.666 | Stabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
D/N | 0.1414 | likely_benign | 0.181 | benign | -0.43 | Destabilizing | 0.122 | N | 0.187 | neutral | N | 0.480061178 | None | None | I |
D/P | 0.9444 | likely_pathogenic | 0.9635 | pathogenic | -0.014 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | I |
D/Q | 0.9003 | likely_pathogenic | 0.9444 | pathogenic | -0.354 | Destabilizing | 0.996 | D | 0.621 | neutral | None | None | None | None | I |
D/R | 0.9286 | likely_pathogenic | 0.9595 | pathogenic | -0.175 | Destabilizing | 0.996 | D | 0.718 | prob.delet. | None | None | None | None | I |
D/S | 0.3983 | ambiguous | 0.5158 | ambiguous | -0.614 | Destabilizing | 0.97 | D | 0.549 | neutral | None | None | None | None | I |
D/T | 0.6106 | likely_pathogenic | 0.7687 | pathogenic | -0.39 | Destabilizing | 0.97 | D | 0.595 | neutral | None | None | None | None | I |
D/V | 0.7524 | likely_pathogenic | 0.8754 | pathogenic | -0.014 | Destabilizing | 0.998 | D | 0.753 | deleterious | D | 0.61218926 | None | None | I |
D/W | 0.987 | likely_pathogenic | 0.9915 | pathogenic | -0.501 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
D/Y | 0.6357 | likely_pathogenic | 0.7514 | pathogenic | -0.359 | Destabilizing | 0.998 | D | 0.757 | deleterious | D | 0.697521741 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.