Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1590 | 4993;4994;4995 | chr2:178777195;178777194;178777193 | chr2:179641922;179641921;179641920 |
N2AB | 1590 | 4993;4994;4995 | chr2:178777195;178777194;178777193 | chr2:179641922;179641921;179641920 |
N2A | 1590 | 4993;4994;4995 | chr2:178777195;178777194;178777193 | chr2:179641922;179641921;179641920 |
N2B | 1544 | 4855;4856;4857 | chr2:178777195;178777194;178777193 | chr2:179641922;179641921;179641920 |
Novex-1 | 1544 | 4855;4856;4857 | chr2:178777195;178777194;178777193 | chr2:179641922;179641921;179641920 |
Novex-2 | 1544 | 4855;4856;4857 | chr2:178777195;178777194;178777193 | chr2:179641922;179641921;179641920 |
Novex-3 | 1590 | 4993;4994;4995 | chr2:178777195;178777194;178777193 | chr2:179641922;179641921;179641920 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.988 | N | 0.763 | 0.213 | 0.477762074677 | gnomAD-4.0.0 | 1.23138E-05 | None | None | None | None | N | None | 2.98757E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.52886E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9829 | likely_pathogenic | 0.9721 | pathogenic | -2.288 | Highly Destabilizing | 0.938 | D | 0.567 | neutral | None | None | None | None | N |
L/C | 0.9823 | likely_pathogenic | 0.9729 | pathogenic | -1.975 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
L/D | 0.9995 | likely_pathogenic | 0.9991 | pathogenic | -1.807 | Destabilizing | 0.998 | D | 0.791 | deleterious | None | None | None | None | N |
L/E | 0.9927 | likely_pathogenic | 0.987 | pathogenic | -1.674 | Destabilizing | 0.995 | D | 0.769 | deleterious | None | None | None | None | N |
L/F | 0.9287 | likely_pathogenic | 0.8751 | pathogenic | -1.509 | Destabilizing | 0.988 | D | 0.763 | deleterious | N | 0.446616518 | None | None | N |
L/G | 0.994 | likely_pathogenic | 0.9909 | pathogenic | -2.736 | Highly Destabilizing | 0.995 | D | 0.761 | deleterious | None | None | None | None | N |
L/H | 0.9853 | likely_pathogenic | 0.9735 | pathogenic | -1.911 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
L/I | 0.6931 | likely_pathogenic | 0.6052 | pathogenic | -1.05 | Destabilizing | 0.938 | D | 0.517 | neutral | None | None | None | None | N |
L/K | 0.9728 | likely_pathogenic | 0.9577 | pathogenic | -1.556 | Destabilizing | 0.995 | D | 0.741 | deleterious | None | None | None | None | N |
L/M | 0.5926 | likely_pathogenic | 0.4674 | ambiguous | -1.15 | Destabilizing | 0.994 | D | 0.785 | deleterious | N | 0.468782313 | None | None | N |
L/N | 0.9937 | likely_pathogenic | 0.9887 | pathogenic | -1.657 | Destabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | N |
L/P | 0.9997 | likely_pathogenic | 0.9995 | pathogenic | -1.438 | Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | N |
L/Q | 0.9663 | likely_pathogenic | 0.9363 | pathogenic | -1.683 | Destabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | N |
L/R | 0.9622 | likely_pathogenic | 0.9458 | pathogenic | -1.138 | Destabilizing | 0.995 | D | 0.787 | deleterious | None | None | None | None | N |
L/S | 0.9962 | likely_pathogenic | 0.9921 | pathogenic | -2.477 | Highly Destabilizing | 0.994 | D | 0.747 | deleterious | N | 0.447437556 | None | None | N |
L/T | 0.986 | likely_pathogenic | 0.9733 | pathogenic | -2.203 | Highly Destabilizing | 0.991 | D | 0.735 | prob.delet. | None | None | None | None | N |
L/V | 0.8016 | likely_pathogenic | 0.7205 | pathogenic | -1.438 | Destabilizing | 0.067 | N | 0.364 | neutral | N | 0.482904581 | None | None | N |
L/W | 0.9812 | likely_pathogenic | 0.9677 | pathogenic | -1.629 | Destabilizing | 0.999 | D | 0.79 | deleterious | D | 0.539406131 | None | None | N |
L/Y | 0.9813 | likely_pathogenic | 0.9664 | pathogenic | -1.383 | Destabilizing | 0.995 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.