Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15904 | 47935;47936;47937 | chr2:178617375;178617374;178617373 | chr2:179482102;179482101;179482100 |
N2AB | 14263 | 43012;43013;43014 | chr2:178617375;178617374;178617373 | chr2:179482102;179482101;179482100 |
N2A | 13336 | 40231;40232;40233 | chr2:178617375;178617374;178617373 | chr2:179482102;179482101;179482100 |
N2B | 6839 | 20740;20741;20742 | chr2:178617375;178617374;178617373 | chr2:179482102;179482101;179482100 |
Novex-1 | 6964 | 21115;21116;21117 | chr2:178617375;178617374;178617373 | chr2:179482102;179482101;179482100 |
Novex-2 | 7031 | 21316;21317;21318 | chr2:178617375;178617374;178617373 | chr2:179482102;179482101;179482100 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 1.0 | N | 0.58 | 0.513 | 0.333154297509 | gnomAD-4.0.0 | 3.48457E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.56253E-05 | None | 0 | 0 | 3.63026E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1402 | likely_benign | 0.1397 | benign | -0.05 | Destabilizing | 1.0 | D | 0.641 | neutral | N | 0.469566108 | None | None | N |
D/C | 0.571 | likely_pathogenic | 0.5585 | ambiguous | -0.177 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
D/E | 0.1076 | likely_benign | 0.11 | benign | -0.107 | Destabilizing | 1.0 | D | 0.443 | neutral | N | 0.460817336 | None | None | N |
D/F | 0.6111 | likely_pathogenic | 0.6246 | pathogenic | -0.128 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
D/G | 0.1019 | likely_benign | 0.1006 | benign | -0.165 | Destabilizing | 1.0 | D | 0.58 | neutral | N | 0.466585155 | None | None | N |
D/H | 0.2942 | likely_benign | 0.2859 | benign | 0.452 | Stabilizing | 1.0 | D | 0.635 | neutral | D | 0.566979477 | None | None | N |
D/I | 0.3479 | ambiguous | 0.3501 | ambiguous | 0.189 | Stabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
D/K | 0.2181 | likely_benign | 0.2128 | benign | 0.284 | Stabilizing | 1.0 | D | 0.609 | neutral | None | None | None | None | N |
D/L | 0.3154 | likely_benign | 0.3188 | benign | 0.189 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
D/M | 0.5107 | ambiguous | 0.5175 | ambiguous | -0.006 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
D/N | 0.1009 | likely_benign | 0.1019 | benign | 0.192 | Stabilizing | 1.0 | D | 0.578 | neutral | N | 0.474694324 | None | None | N |
D/P | 0.3946 | ambiguous | 0.4042 | ambiguous | 0.128 | Stabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
D/Q | 0.2247 | likely_benign | 0.2187 | benign | 0.195 | Stabilizing | 1.0 | D | 0.624 | neutral | None | None | None | None | N |
D/R | 0.2952 | likely_benign | 0.2821 | benign | 0.541 | Stabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
D/S | 0.1139 | likely_benign | 0.1164 | benign | 0.027 | Stabilizing | 1.0 | D | 0.577 | neutral | None | None | None | None | N |
D/T | 0.1869 | likely_benign | 0.193 | benign | 0.12 | Stabilizing | 1.0 | D | 0.61 | neutral | None | None | None | None | N |
D/V | 0.1873 | likely_benign | 0.1868 | benign | 0.128 | Stabilizing | 1.0 | D | 0.718 | prob.delet. | N | 0.46537685 | None | None | N |
D/W | 0.7858 | likely_pathogenic | 0.7917 | pathogenic | -0.081 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
D/Y | 0.2367 | likely_benign | 0.2394 | benign | 0.093 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | N | 0.501245665 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.