Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15907 | 47944;47945;47946 | chr2:178617366;178617365;178617364 | chr2:179482093;179482092;179482091 |
N2AB | 14266 | 43021;43022;43023 | chr2:178617366;178617365;178617364 | chr2:179482093;179482092;179482091 |
N2A | 13339 | 40240;40241;40242 | chr2:178617366;178617365;178617364 | chr2:179482093;179482092;179482091 |
N2B | 6842 | 20749;20750;20751 | chr2:178617366;178617365;178617364 | chr2:179482093;179482092;179482091 |
Novex-1 | 6967 | 21124;21125;21126 | chr2:178617366;178617365;178617364 | chr2:179482093;179482092;179482091 |
Novex-2 | 7034 | 21325;21326;21327 | chr2:178617366;178617365;178617364 | chr2:179482093;179482092;179482091 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.002 | N | 0.147 | 0.159 | 0.318540980066 | gnomAD-4.0.0 | 4.88482E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.35601E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4361 | ambiguous | 0.5223 | ambiguous | -1.32 | Destabilizing | 0.129 | N | 0.317 | neutral | None | None | None | None | I |
I/C | 0.65 | likely_pathogenic | 0.6972 | pathogenic | -0.627 | Destabilizing | 0.983 | D | 0.323 | neutral | None | None | None | None | I |
I/D | 0.6097 | likely_pathogenic | 0.6539 | pathogenic | -0.696 | Destabilizing | 0.716 | D | 0.373 | neutral | None | None | None | None | I |
I/E | 0.339 | likely_benign | 0.3448 | ambiguous | -0.741 | Destabilizing | 0.716 | D | 0.37 | neutral | None | None | None | None | I |
I/F | 0.1639 | likely_benign | 0.1964 | benign | -1.013 | Destabilizing | 0.002 | N | 0.147 | neutral | N | 0.475837099 | None | None | I |
I/G | 0.6561 | likely_pathogenic | 0.7123 | pathogenic | -1.583 | Destabilizing | 0.418 | N | 0.335 | neutral | None | None | None | None | I |
I/H | 0.3276 | likely_benign | 0.3486 | ambiguous | -0.761 | Destabilizing | 0.983 | D | 0.322 | neutral | None | None | None | None | I |
I/K | 0.1957 | likely_benign | 0.1855 | benign | -0.805 | Destabilizing | 0.716 | D | 0.36 | neutral | None | None | None | None | I |
I/L | 0.1062 | likely_benign | 0.1209 | benign | -0.702 | Destabilizing | None | N | 0.087 | neutral | N | 0.428703186 | None | None | I |
I/M | 0.1019 | likely_benign | 0.1126 | benign | -0.475 | Destabilizing | 0.655 | D | 0.375 | neutral | N | 0.476261585 | None | None | I |
I/N | 0.2137 | likely_benign | 0.2252 | benign | -0.509 | Destabilizing | 0.655 | D | 0.376 | neutral | N | 0.475564153 | None | None | I |
I/P | 0.906 | likely_pathogenic | 0.9094 | pathogenic | -0.875 | Destabilizing | 0.836 | D | 0.363 | neutral | None | None | None | None | I |
I/Q | 0.2288 | likely_benign | 0.2388 | benign | -0.744 | Destabilizing | 0.836 | D | 0.341 | neutral | None | None | None | None | I |
I/R | 0.1874 | likely_benign | 0.1806 | benign | -0.159 | Destabilizing | 0.716 | D | 0.364 | neutral | None | None | None | None | I |
I/S | 0.3231 | likely_benign | 0.3576 | ambiguous | -1.058 | Destabilizing | 0.213 | N | 0.311 | neutral | N | 0.465614306 | None | None | I |
I/T | 0.2839 | likely_benign | 0.3547 | ambiguous | -0.996 | Destabilizing | 0.002 | N | 0.161 | neutral | N | 0.457236442 | None | None | I |
I/V | 0.0972 | likely_benign | 0.112 | benign | -0.875 | Destabilizing | 0.001 | N | 0.121 | neutral | N | 0.435329085 | None | None | I |
I/W | 0.6217 | likely_pathogenic | 0.6802 | pathogenic | -1.037 | Destabilizing | 0.983 | D | 0.329 | neutral | None | None | None | None | I |
I/Y | 0.3756 | ambiguous | 0.3831 | ambiguous | -0.827 | Destabilizing | 0.557 | D | 0.369 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.