Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1590847947;47948;47949 chr2:178617363;178617362;178617361chr2:179482090;179482089;179482088
N2AB1426743024;43025;43026 chr2:178617363;178617362;178617361chr2:179482090;179482089;179482088
N2A1334040243;40244;40245 chr2:178617363;178617362;178617361chr2:179482090;179482089;179482088
N2B684320752;20753;20754 chr2:178617363;178617362;178617361chr2:179482090;179482089;179482088
Novex-1696821127;21128;21129 chr2:178617363;178617362;178617361chr2:179482090;179482089;179482088
Novex-2703521328;21329;21330 chr2:178617363;178617362;178617361chr2:179482090;179482089;179482088
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: CGT
  • RefSeq wild type template codon: GCA
  • Domain: Fn3-3
  • Domain position: 50
  • Structural Position: 67
  • Q(SASA): 0.253
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/C rs767724702 -0.554 1.0 D 0.745 0.427 0.792423958598 gnomAD-2.1.1 9.38E-06 None None None None I None 0 0 None 0 6.4E-05 None 0 None 0 1.02E-05 0
R/C rs767724702 -0.554 1.0 D 0.745 0.427 0.792423958598 gnomAD-4.0.0 5.58773E-06 None None None None I None 0 0 None 0 0 None 0 0 7.26823E-06 0 0
R/H rs72677237 -1.517 1.0 N 0.805 0.368 None gnomAD-2.1.1 6.46738E-03 None None None None I None 1.11329E-03 4.76737E-03 None 2.40035E-02 0 None 1.08364E-02 None 1.80596E-03 7.38292E-03 1.01587E-02
R/H rs72677237 -1.517 1.0 N 0.805 0.368 None gnomAD-3.1.2 5.39843E-03 None None None None I None 1.44955E-03 4.39402E-03 0 2.74091E-02 0 None 1.88253E-03 2.8481E-02 7.52755E-03 8.07119E-03 9.10834E-03
R/H rs72677237 -1.517 1.0 N 0.805 0.368 None 1000 genomes 2.99521E-03 None None None None I None 8E-04 8.6E-03 None None 0 6E-03 None None None 2E-03 None
R/H rs72677237 -1.517 1.0 N 0.805 0.368 None gnomAD-4.0.0 6.40655E-03 None None None None I None 1.49803E-03 4.87999E-03 None 2.6441E-02 0 None 2.57781E-03 1.52327E-02 6.27491E-03 1.08391E-02 8.45383E-03
R/P None None 1.0 N 0.746 0.38 0.630571860293 gnomAD-4.0.0 6.98924E-07 None None None None I None 0 0 None 0 0 None 0 1.76056E-04 0 0 0
R/S rs767724702 -0.967 1.0 N 0.734 0.356 0.548188646194 gnomAD-2.1.1 3.19E-05 None None None None I None 1.14863E-04 0 None 0 0 None 0 None 0 0 0
R/S rs767724702 -0.967 1.0 N 0.734 0.356 0.548188646194 gnomAD-3.1.2 6.59E-06 None None None None I None 2.42E-05 0 0 0 0 None 0 0 0 0 0
R/S rs767724702 -0.967 1.0 N 0.734 0.356 0.548188646194 gnomAD-4.0.0 5.68354E-06 None None None None I None 1.36307E-05 0 None 0 0 None 0 0 6.846E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.7843 likely_pathogenic 0.7961 pathogenic -0.858 Destabilizing 0.999 D 0.641 neutral None None None None I
R/C 0.3762 ambiguous 0.3661 ambiguous -0.822 Destabilizing 1.0 D 0.745 deleterious D 0.614117672 None None I
R/D 0.9573 likely_pathogenic 0.9606 pathogenic -0.091 Destabilizing 1.0 D 0.757 deleterious None None None None I
R/E 0.8013 likely_pathogenic 0.7967 pathogenic 0.033 Stabilizing 0.999 D 0.708 prob.delet. None None None None I
R/F 0.8783 likely_pathogenic 0.8894 pathogenic -0.695 Destabilizing 1.0 D 0.738 prob.delet. None None None None I
R/G 0.7962 likely_pathogenic 0.8064 pathogenic -1.171 Destabilizing 1.0 D 0.665 neutral N 0.477129663 None None I
R/H 0.2943 likely_benign 0.2752 benign -1.419 Destabilizing 1.0 D 0.805 deleterious N 0.512279679 None None I
R/I 0.5661 likely_pathogenic 0.541 ambiguous -0.018 Destabilizing 1.0 D 0.753 deleterious None None None None I
R/K 0.2281 likely_benign 0.2582 benign -0.906 Destabilizing 0.998 D 0.556 neutral None None None None I
R/L 0.5082 ambiguous 0.504 ambiguous -0.018 Destabilizing 1.0 D 0.665 neutral N 0.473830233 None None I
R/M 0.6929 likely_pathogenic 0.698 pathogenic -0.334 Destabilizing 1.0 D 0.773 deleterious None None None None I
R/N 0.904 likely_pathogenic 0.9095 pathogenic -0.354 Destabilizing 1.0 D 0.783 deleterious None None None None I
R/P 0.6583 likely_pathogenic 0.634 pathogenic -0.278 Destabilizing 1.0 D 0.746 deleterious N 0.4803224 None None I
R/Q 0.2461 likely_benign 0.2466 benign -0.525 Destabilizing 1.0 D 0.772 deleterious None None None None I
R/S 0.874 likely_pathogenic 0.8854 pathogenic -1.142 Destabilizing 1.0 D 0.734 prob.delet. N 0.477214922 None None I
R/T 0.6571 likely_pathogenic 0.6881 pathogenic -0.836 Destabilizing 1.0 D 0.728 prob.delet. None None None None I
R/V 0.6767 likely_pathogenic 0.6752 pathogenic -0.278 Destabilizing 1.0 D 0.757 deleterious None None None None I
R/W 0.4734 ambiguous 0.4883 ambiguous -0.333 Destabilizing 1.0 D 0.753 deleterious None None None None I
R/Y 0.7543 likely_pathogenic 0.7662 pathogenic -0.045 Destabilizing 1.0 D 0.754 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.