Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15917 | 47974;47975;47976 | chr2:178617336;178617335;178617334 | chr2:179482063;179482062;179482061 |
N2AB | 14276 | 43051;43052;43053 | chr2:178617336;178617335;178617334 | chr2:179482063;179482062;179482061 |
N2A | 13349 | 40270;40271;40272 | chr2:178617336;178617335;178617334 | chr2:179482063;179482062;179482061 |
N2B | 6852 | 20779;20780;20781 | chr2:178617336;178617335;178617334 | chr2:179482063;179482062;179482061 |
Novex-1 | 6977 | 21154;21155;21156 | chr2:178617336;178617335;178617334 | chr2:179482063;179482062;179482061 |
Novex-2 | 7044 | 21355;21356;21357 | chr2:178617336;178617335;178617334 | chr2:179482063;179482062;179482061 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/Q | None | None | 1.0 | N | 0.801 | 0.479 | 0.704706922069 | gnomAD-4.0.0 | 3.38924E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.21543E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3741 | ambiguous | 0.3616 | ambiguous | -1.832 | Destabilizing | 0.999 | D | 0.632 | neutral | None | None | None | None | I |
L/C | 0.4975 | ambiguous | 0.4075 | ambiguous | -0.907 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
L/D | 0.7674 | likely_pathogenic | 0.7541 | pathogenic | -1.746 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
L/E | 0.4522 | ambiguous | 0.4371 | ambiguous | -1.589 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
L/F | 0.3518 | ambiguous | 0.3676 | ambiguous | -1.096 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | I |
L/G | 0.5863 | likely_pathogenic | 0.5722 | pathogenic | -2.279 | Highly Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
L/H | 0.3941 | ambiguous | 0.396 | ambiguous | -1.543 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | I |
L/I | 0.1901 | likely_benign | 0.202 | benign | -0.591 | Destabilizing | 0.999 | D | 0.487 | neutral | None | None | None | None | I |
L/K | 0.2334 | likely_benign | 0.2238 | benign | -1.251 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
L/M | 0.1338 | likely_benign | 0.1362 | benign | -0.417 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | N | 0.486724873 | None | None | I |
L/N | 0.3374 | likely_benign | 0.3237 | benign | -1.438 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
L/P | 0.3562 | ambiguous | 0.307 | benign | -0.981 | Destabilizing | 1.0 | D | 0.826 | deleterious | N | 0.45738482 | None | None | I |
L/Q | 0.1876 | likely_benign | 0.192 | benign | -1.405 | Destabilizing | 1.0 | D | 0.801 | deleterious | N | 0.450393571 | None | None | I |
L/R | 0.1945 | likely_benign | 0.1937 | benign | -0.888 | Destabilizing | 1.0 | D | 0.797 | deleterious | N | 0.45493756 | None | None | I |
L/S | 0.4731 | ambiguous | 0.4688 | ambiguous | -2.074 | Highly Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
L/T | 0.2006 | likely_benign | 0.1886 | benign | -1.783 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | I |
L/V | 0.1521 | likely_benign | 0.1552 | benign | -0.981 | Destabilizing | 0.999 | D | 0.543 | neutral | N | 0.46647584 | None | None | I |
L/W | 0.4803 | ambiguous | 0.4857 | ambiguous | -1.395 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
L/Y | 0.5185 | ambiguous | 0.5237 | ambiguous | -1.047 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.