Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15925 | 47998;47999;48000 | chr2:178617222;178617221;178617220 | chr2:179481949;179481948;179481947 |
N2AB | 14284 | 43075;43076;43077 | chr2:178617222;178617221;178617220 | chr2:179481949;179481948;179481947 |
N2A | 13357 | 40294;40295;40296 | chr2:178617222;178617221;178617220 | chr2:179481949;179481948;179481947 |
N2B | 6860 | 20803;20804;20805 | chr2:178617222;178617221;178617220 | chr2:179481949;179481948;179481947 |
Novex-1 | 6985 | 21178;21179;21180 | chr2:178617222;178617221;178617220 | chr2:179481949;179481948;179481947 |
Novex-2 | 7052 | 21379;21380;21381 | chr2:178617222;178617221;178617220 | chr2:179481949;179481948;179481947 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | None | N | 0.101 | 0.088 | 0.0762999501168 | gnomAD-4.0.0 | 7.15785E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.24996E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1271 | likely_benign | 0.1432 | benign | -0.583 | Destabilizing | 0.012 | N | 0.339 | neutral | N | 0.482026197 | None | None | N |
E/C | 0.616 | likely_pathogenic | 0.6631 | pathogenic | -0.242 | Destabilizing | 0.864 | D | 0.288 | neutral | None | None | None | None | N |
E/D | 0.1623 | likely_benign | 0.207 | benign | -0.527 | Destabilizing | 0.024 | N | 0.283 | neutral | N | 0.483310652 | None | None | N |
E/F | 0.6008 | likely_pathogenic | 0.6654 | pathogenic | -0.114 | Destabilizing | 0.628 | D | 0.303 | neutral | None | None | None | None | N |
E/G | 0.1373 | likely_benign | 0.1622 | benign | -0.847 | Destabilizing | 0.055 | N | 0.353 | neutral | D | 0.556607309 | None | None | N |
E/H | 0.283 | likely_benign | 0.3175 | benign | 0.102 | Stabilizing | 0.214 | N | 0.262 | neutral | None | None | None | None | N |
E/I | 0.1989 | likely_benign | 0.2238 | benign | 0.106 | Stabilizing | 0.356 | N | 0.322 | neutral | None | None | None | None | N |
E/K | 0.0799 | likely_benign | 0.076 | benign | 0.185 | Stabilizing | None | N | 0.101 | neutral | N | 0.393191746 | None | None | N |
E/L | 0.2105 | likely_benign | 0.2475 | benign | 0.106 | Stabilizing | 0.072 | N | 0.369 | neutral | None | None | None | None | N |
E/M | 0.3002 | likely_benign | 0.3479 | ambiguous | 0.246 | Stabilizing | 0.356 | N | 0.303 | neutral | None | None | None | None | N |
E/N | 0.1973 | likely_benign | 0.2403 | benign | -0.398 | Destabilizing | 0.072 | N | 0.203 | neutral | None | None | None | None | N |
E/P | 0.3585 | ambiguous | 0.3998 | ambiguous | -0.103 | Destabilizing | 0.136 | N | 0.359 | neutral | None | None | None | None | N |
E/Q | 0.0781 | likely_benign | 0.0841 | benign | -0.303 | Destabilizing | None | N | 0.099 | neutral | N | 0.474145505 | None | None | N |
E/R | 0.1249 | likely_benign | 0.1164 | benign | 0.51 | Stabilizing | None | N | 0.107 | neutral | None | None | None | None | N |
E/S | 0.1721 | likely_benign | 0.1949 | benign | -0.568 | Destabilizing | 0.016 | N | 0.285 | neutral | None | None | None | None | N |
E/T | 0.1407 | likely_benign | 0.1636 | benign | -0.334 | Destabilizing | 0.072 | N | 0.305 | neutral | None | None | None | None | N |
E/V | 0.1261 | likely_benign | 0.1413 | benign | -0.103 | Destabilizing | 0.055 | N | 0.344 | neutral | N | 0.462113801 | None | None | N |
E/W | 0.7268 | likely_pathogenic | 0.7713 | pathogenic | 0.171 | Stabilizing | 0.864 | D | 0.296 | neutral | None | None | None | None | N |
E/Y | 0.4561 | ambiguous | 0.5158 | ambiguous | 0.168 | Stabilizing | 0.356 | N | 0.311 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.