Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15926 | 48001;48002;48003 | chr2:178617219;178617218;178617217 | chr2:179481946;179481945;179481944 |
N2AB | 14285 | 43078;43079;43080 | chr2:178617219;178617218;178617217 | chr2:179481946;179481945;179481944 |
N2A | 13358 | 40297;40298;40299 | chr2:178617219;178617218;178617217 | chr2:179481946;179481945;179481944 |
N2B | 6861 | 20806;20807;20808 | chr2:178617219;178617218;178617217 | chr2:179481946;179481945;179481944 |
Novex-1 | 6986 | 21181;21182;21183 | chr2:178617219;178617218;178617217 | chr2:179481946;179481945;179481944 |
Novex-2 | 7053 | 21382;21383;21384 | chr2:178617219;178617218;178617217 | chr2:179481946;179481945;179481944 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.025 | N | 0.32 | 0.093 | 0.366466682447 | gnomAD-4.0.0 | 1.20188E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31421E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1882 | likely_benign | 0.1886 | benign | -0.086 | Destabilizing | None | N | 0.075 | neutral | None | None | None | None | N |
K/C | 0.6064 | likely_pathogenic | 0.6131 | pathogenic | -0.114 | Destabilizing | 0.781 | D | 0.36 | neutral | None | None | None | None | N |
K/D | 0.4271 | ambiguous | 0.4371 | ambiguous | 0.022 | Stabilizing | 0.033 | N | 0.322 | neutral | None | None | None | None | N |
K/E | 0.1332 | likely_benign | 0.132 | benign | 0.024 | Stabilizing | 0.011 | N | 0.275 | neutral | N | 0.346018727 | None | None | N |
K/F | 0.6175 | likely_pathogenic | 0.629 | pathogenic | -0.31 | Destabilizing | 0.001 | N | 0.209 | neutral | None | None | None | None | N |
K/G | 0.3603 | ambiguous | 0.3701 | ambiguous | -0.3 | Destabilizing | 0.033 | N | 0.278 | neutral | None | None | None | None | N |
K/H | 0.2922 | likely_benign | 0.2844 | benign | -0.675 | Destabilizing | 0.001 | N | 0.164 | neutral | None | None | None | None | N |
K/I | 0.2481 | likely_benign | 0.2474 | benign | 0.403 | Stabilizing | 0.111 | N | 0.434 | neutral | N | 0.478480436 | None | None | N |
K/L | 0.3028 | likely_benign | 0.3075 | benign | 0.403 | Stabilizing | 0.033 | N | 0.275 | neutral | None | None | None | None | N |
K/M | 0.1846 | likely_benign | 0.1875 | benign | 0.4 | Stabilizing | 0.54 | D | 0.353 | neutral | None | None | None | None | N |
K/N | 0.2553 | likely_benign | 0.2601 | benign | 0.285 | Stabilizing | None | N | 0.118 | neutral | N | 0.444920977 | None | None | N |
K/P | 0.2894 | likely_benign | 0.2757 | benign | 0.268 | Stabilizing | None | N | 0.12 | neutral | None | None | None | None | N |
K/Q | 0.1323 | likely_benign | 0.1344 | benign | 0.028 | Stabilizing | None | N | 0.075 | neutral | N | 0.431454601 | None | None | N |
K/R | 0.0972 | likely_benign | 0.0925 | benign | -0.001 | Destabilizing | 0.025 | N | 0.32 | neutral | N | 0.469209826 | None | None | N |
K/S | 0.275 | likely_benign | 0.2788 | benign | -0.254 | Destabilizing | 0.033 | N | 0.277 | neutral | None | None | None | None | N |
K/T | 0.1362 | likely_benign | 0.1405 | benign | -0.102 | Destabilizing | 0.049 | N | 0.326 | neutral | N | 0.409859533 | None | None | N |
K/V | 0.2408 | likely_benign | 0.2415 | benign | 0.268 | Stabilizing | 0.033 | N | 0.305 | neutral | None | None | None | None | N |
K/W | 0.7141 | likely_pathogenic | 0.7168 | pathogenic | -0.264 | Destabilizing | 0.781 | D | 0.361 | neutral | None | None | None | None | N |
K/Y | 0.462 | ambiguous | 0.4634 | ambiguous | 0.091 | Stabilizing | 0.001 | N | 0.079 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.