Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15927 | 48004;48005;48006 | chr2:178617216;178617215;178617214 | chr2:179481943;179481942;179481941 |
N2AB | 14286 | 43081;43082;43083 | chr2:178617216;178617215;178617214 | chr2:179481943;179481942;179481941 |
N2A | 13359 | 40300;40301;40302 | chr2:178617216;178617215;178617214 | chr2:179481943;179481942;179481941 |
N2B | 6862 | 20809;20810;20811 | chr2:178617216;178617215;178617214 | chr2:179481943;179481942;179481941 |
Novex-1 | 6987 | 21184;21185;21186 | chr2:178617216;178617215;178617214 | chr2:179481943;179481942;179481941 |
Novex-2 | 7054 | 21385;21386;21387 | chr2:178617216;178617215;178617214 | chr2:179481943;179481942;179481941 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | rs2057501392 | None | 0.056 | D | 0.566 | 0.351 | 0.383089235449 | gnomAD-4.0.0 | 7.14299E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.23613E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4071 | ambiguous | 0.4136 | ambiguous | -0.512 | Destabilizing | 0.805 | D | 0.601 | neutral | D | 0.537801914 | None | None | N |
G/C | 0.5033 | ambiguous | 0.4923 | ambiguous | -0.79 | Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | N |
G/D | 0.2227 | likely_benign | 0.2284 | benign | -1.076 | Destabilizing | 0.996 | D | 0.659 | neutral | None | None | None | None | N |
G/E | 0.2972 | likely_benign | 0.3002 | benign | -1.239 | Destabilizing | 0.983 | D | 0.713 | prob.delet. | D | 0.569627682 | None | None | N |
G/F | 0.8577 | likely_pathogenic | 0.8536 | pathogenic | -1.238 | Destabilizing | 0.154 | N | 0.639 | neutral | None | None | None | None | N |
G/H | 0.6498 | likely_pathogenic | 0.6481 | pathogenic | -0.832 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
G/I | 0.785 | likely_pathogenic | 0.7914 | pathogenic | -0.558 | Destabilizing | 0.95 | D | 0.696 | prob.neutral | None | None | None | None | N |
G/K | 0.62 | likely_pathogenic | 0.6132 | pathogenic | -1.043 | Destabilizing | 0.987 | D | 0.716 | prob.delet. | None | None | None | None | N |
G/L | 0.7985 | likely_pathogenic | 0.8066 | pathogenic | -0.558 | Destabilizing | 0.073 | N | 0.583 | neutral | None | None | None | None | N |
G/M | 0.7958 | likely_pathogenic | 0.803 | pathogenic | -0.335 | Destabilizing | 0.993 | D | 0.747 | deleterious | None | None | None | None | N |
G/N | 0.311 | likely_benign | 0.3279 | benign | -0.598 | Destabilizing | 0.996 | D | 0.684 | prob.neutral | None | None | None | None | N |
G/P | 0.9701 | likely_pathogenic | 0.9618 | pathogenic | -0.508 | Destabilizing | 0.996 | D | 0.72 | prob.delet. | None | None | None | None | N |
G/Q | 0.4917 | ambiguous | 0.5035 | ambiguous | -0.955 | Destabilizing | 0.996 | D | 0.719 | prob.delet. | None | None | None | None | N |
G/R | 0.5386 | ambiguous | 0.5242 | ambiguous | -0.509 | Destabilizing | 0.983 | D | 0.719 | prob.delet. | D | 0.646917118 | None | None | N |
G/S | 0.2297 | likely_benign | 0.2412 | benign | -0.718 | Destabilizing | 0.987 | D | 0.666 | neutral | None | None | None | None | N |
G/T | 0.4541 | ambiguous | 0.4691 | ambiguous | -0.828 | Destabilizing | 0.975 | D | 0.683 | prob.neutral | None | None | None | None | N |
G/V | 0.6379 | likely_pathogenic | 0.6474 | pathogenic | -0.508 | Destabilizing | 0.056 | N | 0.566 | neutral | D | 0.648599914 | None | None | N |
G/W | 0.6674 | likely_pathogenic | 0.6394 | pathogenic | -1.398 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
G/Y | 0.7031 | likely_pathogenic | 0.6939 | pathogenic | -1.061 | Destabilizing | 0.95 | D | 0.742 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.