Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15944 | 48055;48056;48057 | chr2:178617165;178617164;178617163 | chr2:179481892;179481891;179481890 |
N2AB | 14303 | 43132;43133;43134 | chr2:178617165;178617164;178617163 | chr2:179481892;179481891;179481890 |
N2A | 13376 | 40351;40352;40353 | chr2:178617165;178617164;178617163 | chr2:179481892;179481891;179481890 |
N2B | 6879 | 20860;20861;20862 | chr2:178617165;178617164;178617163 | chr2:179481892;179481891;179481890 |
Novex-1 | 7004 | 21235;21236;21237 | chr2:178617165;178617164;178617163 | chr2:179481892;179481891;179481890 |
Novex-2 | 7071 | 21436;21437;21438 | chr2:178617165;178617164;178617163 | chr2:179481892;179481891;179481890 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.999 | N | 0.741 | 0.277 | 0.277317399466 | gnomAD-4.0.0 | 1.614E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.46361E-05 | 0 |
D/V | rs1442512599 | 0.007 | 0.999 | N | 0.779 | 0.521 | 0.59676212909 | gnomAD-4.0.0 | 1.61302E-06 | None | None | None | None | I | None | 0 | 0 | None | 4.81047E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/Y | None | None | 1.0 | D | 0.782 | 0.399 | 0.647688206944 | gnomAD-4.0.0 | 1.614E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.46361E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2676 | likely_benign | 0.1957 | benign | -0.36 | Destabilizing | 0.996 | D | 0.761 | deleterious | N | 0.478382427 | None | None | I |
D/C | 0.807 | likely_pathogenic | 0.6962 | pathogenic | 0.173 | Stabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | I |
D/E | 0.1871 | likely_benign | 0.1374 | benign | -0.343 | Destabilizing | 0.996 | D | 0.545 | neutral | N | 0.432268265 | None | None | I |
D/F | 0.699 | likely_pathogenic | 0.5738 | pathogenic | -0.465 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
D/G | 0.3804 | ambiguous | 0.296 | benign | -0.528 | Destabilizing | 0.998 | D | 0.757 | deleterious | N | 0.45958717 | None | None | I |
D/H | 0.456 | ambiguous | 0.3686 | ambiguous | -0.39 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | N | 0.511974871 | None | None | I |
D/I | 0.4538 | ambiguous | 0.3533 | ambiguous | 0.028 | Stabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
D/K | 0.4433 | ambiguous | 0.3625 | ambiguous | 0.4 | Stabilizing | 0.91 | D | 0.482 | neutral | None | None | None | None | I |
D/L | 0.4374 | ambiguous | 0.3539 | ambiguous | 0.028 | Stabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | I |
D/M | 0.7035 | likely_pathogenic | 0.5857 | pathogenic | 0.294 | Stabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
D/N | 0.1825 | likely_benign | 0.1511 | benign | 0.161 | Stabilizing | 0.999 | D | 0.741 | deleterious | N | 0.504939443 | None | None | I |
D/P | 0.6437 | likely_pathogenic | 0.5358 | ambiguous | -0.08 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
D/Q | 0.4351 | ambiguous | 0.3449 | ambiguous | 0.16 | Stabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | I |
D/R | 0.5461 | ambiguous | 0.4651 | ambiguous | 0.438 | Stabilizing | 0.998 | D | 0.799 | deleterious | None | None | None | None | I |
D/S | 0.2089 | likely_benign | 0.1675 | benign | 0.072 | Stabilizing | 0.997 | D | 0.7 | prob.neutral | None | None | None | None | I |
D/T | 0.3966 | ambiguous | 0.2994 | benign | 0.201 | Stabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
D/V | 0.3037 | likely_benign | 0.2228 | benign | -0.08 | Destabilizing | 0.999 | D | 0.779 | deleterious | N | 0.473328214 | None | None | I |
D/W | 0.9241 | likely_pathogenic | 0.8846 | pathogenic | -0.361 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
D/Y | 0.3411 | ambiguous | 0.2685 | benign | -0.233 | Destabilizing | 1.0 | D | 0.782 | deleterious | D | 0.578994642 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.