Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15977 | 48154;48155;48156 | chr2:178616960;178616959;178616958 | chr2:179481687;179481686;179481685 |
N2AB | 14336 | 43231;43232;43233 | chr2:178616960;178616959;178616958 | chr2:179481687;179481686;179481685 |
N2A | 13409 | 40450;40451;40452 | chr2:178616960;178616959;178616958 | chr2:179481687;179481686;179481685 |
N2B | 6912 | 20959;20960;20961 | chr2:178616960;178616959;178616958 | chr2:179481687;179481686;179481685 |
Novex-1 | 7037 | 21334;21335;21336 | chr2:178616960;178616959;178616958 | chr2:179481687;179481686;179481685 |
Novex-2 | 7104 | 21535;21536;21537 | chr2:178616960;178616959;178616958 | chr2:179481687;179481686;179481685 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 1.0 | N | 0.729 | 0.368 | 0.258779203287 | gnomAD-4.0.0 | 1.59343E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.7784E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.5663 | likely_pathogenic | 0.5517 | ambiguous | -0.683 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | N | 0.444868925 | None | None | I |
P/C | 0.945 | likely_pathogenic | 0.9447 | pathogenic | -0.661 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
P/D | 0.8219 | likely_pathogenic | 0.8247 | pathogenic | -0.523 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
P/E | 0.7788 | likely_pathogenic | 0.7586 | pathogenic | -0.637 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
P/F | 0.9864 | likely_pathogenic | 0.9841 | pathogenic | -0.844 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | I |
P/G | 0.5538 | ambiguous | 0.5582 | ambiguous | -0.831 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
P/H | 0.8416 | likely_pathogenic | 0.8295 | pathogenic | -0.342 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
P/I | 0.9726 | likely_pathogenic | 0.9708 | pathogenic | -0.44 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
P/K | 0.8747 | likely_pathogenic | 0.8647 | pathogenic | -0.612 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
P/L | 0.8402 | likely_pathogenic | 0.8254 | pathogenic | -0.44 | Destabilizing | 1.0 | D | 0.747 | deleterious | N | 0.499504563 | None | None | I |
P/M | 0.9521 | likely_pathogenic | 0.9467 | pathogenic | -0.37 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | I |
P/N | 0.8215 | likely_pathogenic | 0.8206 | pathogenic | -0.34 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
P/Q | 0.7686 | likely_pathogenic | 0.7473 | pathogenic | -0.62 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | N | 0.497625357 | None | None | I |
P/R | 0.7768 | likely_pathogenic | 0.7589 | pathogenic | -0.01 | Destabilizing | 1.0 | D | 0.742 | deleterious | N | 0.433927109 | None | None | I |
P/S | 0.6402 | likely_pathogenic | 0.6283 | pathogenic | -0.706 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | N | 0.456430052 | None | None | I |
P/T | 0.6691 | likely_pathogenic | 0.6411 | pathogenic | -0.724 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | N | 0.433927109 | None | None | I |
P/V | 0.9301 | likely_pathogenic | 0.9261 | pathogenic | -0.486 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | I |
P/W | 0.9866 | likely_pathogenic | 0.9843 | pathogenic | -0.903 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | I |
P/Y | 0.9637 | likely_pathogenic | 0.9631 | pathogenic | -0.627 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.