Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15986 | 48181;48182;48183 | chr2:178616933;178616932;178616931 | chr2:179481660;179481659;179481658 |
N2AB | 14345 | 43258;43259;43260 | chr2:178616933;178616932;178616931 | chr2:179481660;179481659;179481658 |
N2A | 13418 | 40477;40478;40479 | chr2:178616933;178616932;178616931 | chr2:179481660;179481659;179481658 |
N2B | 6921 | 20986;20987;20988 | chr2:178616933;178616932;178616931 | chr2:179481660;179481659;179481658 |
Novex-1 | 7046 | 21361;21362;21363 | chr2:178616933;178616932;178616931 | chr2:179481660;179481659;179481658 |
Novex-2 | 7113 | 21562;21563;21564 | chr2:178616933;178616932;178616931 | chr2:179481660;179481659;179481658 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.911 | N | 0.561 | 0.168 | 0.301455362545 | gnomAD-4.0.0 | 1.59334E-06 | None | None | None | None | I | None | 0 | 2.28854E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/R | None | None | 0.989 | N | 0.772 | 0.308 | 0.320256813643 | gnomAD-4.0.0 | 1.59334E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43324E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0821 | likely_benign | 0.0869 | benign | -0.537 | Destabilizing | 0.49 | N | 0.414 | neutral | None | None | None | None | I |
S/C | 0.0532 | likely_benign | 0.0605 | benign | -0.381 | Destabilizing | 0.989 | D | 0.755 | deleterious | N | 0.510168819 | None | None | I |
S/D | 0.9378 | likely_pathogenic | 0.9528 | pathogenic | 0.102 | Stabilizing | 0.971 | D | 0.606 | neutral | None | None | None | None | I |
S/E | 0.9003 | likely_pathogenic | 0.9254 | pathogenic | 0.065 | Stabilizing | 0.971 | D | 0.61 | neutral | None | None | None | None | I |
S/F | 0.2312 | likely_benign | 0.29 | benign | -0.899 | Destabilizing | 0.842 | D | 0.762 | deleterious | None | None | None | None | I |
S/G | 0.2667 | likely_benign | 0.2898 | benign | -0.74 | Destabilizing | 0.911 | D | 0.561 | neutral | N | 0.510168819 | None | None | I |
S/H | 0.6987 | likely_pathogenic | 0.7357 | pathogenic | -1.283 | Destabilizing | 0.991 | D | 0.75 | deleterious | None | None | None | None | I |
S/I | 0.0761 | likely_benign | 0.1198 | benign | -0.118 | Destabilizing | 0.002 | N | 0.417 | neutral | N | 0.368822375 | None | None | I |
S/K | 0.9654 | likely_pathogenic | 0.9762 | pathogenic | -0.558 | Destabilizing | 0.915 | D | 0.609 | neutral | None | None | None | None | I |
S/L | 0.1129 | likely_benign | 0.155 | benign | -0.118 | Destabilizing | 0.325 | N | 0.497 | neutral | None | None | None | None | I |
S/M | 0.1419 | likely_benign | 0.1784 | benign | 0.101 | Stabilizing | 0.949 | D | 0.774 | deleterious | None | None | None | None | I |
S/N | 0.5531 | ambiguous | 0.5849 | pathogenic | -0.428 | Destabilizing | 0.961 | D | 0.614 | neutral | N | 0.505160246 | None | None | I |
S/P | 0.8826 | likely_pathogenic | 0.9282 | pathogenic | -0.224 | Destabilizing | 0.991 | D | 0.777 | deleterious | None | None | None | None | I |
S/Q | 0.8487 | likely_pathogenic | 0.8661 | pathogenic | -0.59 | Destabilizing | 0.991 | D | 0.686 | prob.neutral | None | None | None | None | I |
S/R | 0.9379 | likely_pathogenic | 0.9558 | pathogenic | -0.465 | Destabilizing | 0.989 | D | 0.772 | deleterious | N | 0.510168819 | None | None | I |
S/T | 0.1131 | likely_benign | 0.1183 | benign | -0.474 | Destabilizing | 0.625 | D | 0.565 | neutral | N | 0.501485134 | None | None | I |
S/V | 0.0868 | likely_benign | 0.1139 | benign | -0.224 | Destabilizing | 0.325 | N | 0.497 | neutral | None | None | None | None | I |
S/W | 0.5897 | likely_pathogenic | 0.6538 | pathogenic | -0.889 | Destabilizing | 0.998 | D | 0.787 | deleterious | None | None | None | None | I |
S/Y | 0.2724 | likely_benign | 0.3251 | benign | -0.608 | Destabilizing | 0.991 | D | 0.783 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.