Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15989 | 48190;48191;48192 | chr2:178616924;178616923;178616922 | chr2:179481651;179481650;179481649 |
N2AB | 14348 | 43267;43268;43269 | chr2:178616924;178616923;178616922 | chr2:179481651;179481650;179481649 |
N2A | 13421 | 40486;40487;40488 | chr2:178616924;178616923;178616922 | chr2:179481651;179481650;179481649 |
N2B | 6924 | 20995;20996;20997 | chr2:178616924;178616923;178616922 | chr2:179481651;179481650;179481649 |
Novex-1 | 7049 | 21370;21371;21372 | chr2:178616924;178616923;178616922 | chr2:179481651;179481650;179481649 |
Novex-2 | 7116 | 21571;21572;21573 | chr2:178616924;178616923;178616922 | chr2:179481651;179481650;179481649 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/S | rs2057440561 | None | 1.0 | D | 0.686 | 0.577 | 0.784478220262 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07211E-04 | 0 |
Y/S | rs2057440561 | None | 1.0 | D | 0.686 | 0.577 | 0.784478220262 | gnomAD-4.0.0 | 2.48052E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.39252E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8034 | likely_pathogenic | 0.7662 | pathogenic | -0.32 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | I |
Y/C | 0.4167 | ambiguous | 0.3506 | ambiguous | 0.062 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | D | 0.579631142 | None | None | I |
Y/D | 0.7279 | likely_pathogenic | 0.6886 | pathogenic | 0.606 | Stabilizing | 1.0 | D | 0.706 | prob.neutral | N | 0.499264053 | None | None | I |
Y/E | 0.8942 | likely_pathogenic | 0.8512 | pathogenic | 0.572 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
Y/F | 0.1349 | likely_benign | 0.1194 | benign | -0.291 | Destabilizing | 0.999 | D | 0.559 | neutral | N | 0.508086517 | None | None | I |
Y/G | 0.8349 | likely_pathogenic | 0.8101 | pathogenic | -0.448 | Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | I |
Y/H | 0.3731 | ambiguous | 0.321 | benign | 0.329 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | D | 0.579482874 | None | None | I |
Y/I | 0.6083 | likely_pathogenic | 0.5678 | pathogenic | -0.028 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
Y/K | 0.7563 | likely_pathogenic | 0.6821 | pathogenic | 0.208 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
Y/L | 0.6643 | likely_pathogenic | 0.6157 | pathogenic | -0.028 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | I |
Y/M | 0.7951 | likely_pathogenic | 0.7477 | pathogenic | -0.134 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | I |
Y/N | 0.3832 | ambiguous | 0.3502 | ambiguous | -0.066 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | N | 0.499264053 | None | None | I |
Y/P | 0.9726 | likely_pathogenic | 0.9648 | pathogenic | -0.107 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
Y/Q | 0.792 | likely_pathogenic | 0.7191 | pathogenic | 0.011 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
Y/R | 0.6393 | likely_pathogenic | 0.5601 | ambiguous | 0.329 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
Y/S | 0.406 | ambiguous | 0.3851 | ambiguous | -0.335 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | D | 0.573787355 | None | None | I |
Y/T | 0.7649 | likely_pathogenic | 0.7023 | pathogenic | -0.287 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
Y/V | 0.5715 | likely_pathogenic | 0.5177 | ambiguous | -0.107 | Destabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | I |
Y/W | 0.6046 | likely_pathogenic | 0.5685 | pathogenic | -0.564 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.