Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15991 | 48196;48197;48198 | chr2:178616918;178616917;178616916 | chr2:179481645;179481644;179481643 |
N2AB | 14350 | 43273;43274;43275 | chr2:178616918;178616917;178616916 | chr2:179481645;179481644;179481643 |
N2A | 13423 | 40492;40493;40494 | chr2:178616918;178616917;178616916 | chr2:179481645;179481644;179481643 |
N2B | 6926 | 21001;21002;21003 | chr2:178616918;178616917;178616916 | chr2:179481645;179481644;179481643 |
Novex-1 | 7051 | 21376;21377;21378 | chr2:178616918;178616917;178616916 | chr2:179481645;179481644;179481643 |
Novex-2 | 7118 | 21577;21578;21579 | chr2:178616918;178616917;178616916 | chr2:179481645;179481644;179481643 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs2057438704 | None | 0.468 | N | 0.28 | 0.141 | 0.18995819373 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07297E-04 | 0 |
R/K | rs2057438704 | None | 0.468 | N | 0.28 | 0.141 | 0.18995819373 | gnomAD-4.0.0 | 3.8489E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.02166E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.1959 | likely_benign | 0.2271 | benign | -0.587 | Destabilizing | 0.051 | N | 0.274 | neutral | None | None | None | None | I |
R/C | 0.1454 | likely_benign | 0.1719 | benign | -0.534 | Destabilizing | 0.968 | D | 0.453 | neutral | None | None | None | None | I |
R/D | 0.531 | ambiguous | 0.5809 | pathogenic | 0.041 | Stabilizing | 0.738 | D | 0.528 | neutral | None | None | None | None | I |
R/E | 0.2556 | likely_benign | 0.2981 | benign | 0.131 | Stabilizing | 0.538 | D | 0.299 | neutral | None | None | None | None | I |
R/F | 0.366 | ambiguous | 0.4332 | ambiguous | -0.643 | Destabilizing | 0.582 | D | 0.537 | neutral | None | None | None | None | I |
R/G | 0.2607 | likely_benign | 0.2963 | benign | -0.844 | Destabilizing | 0.468 | N | 0.411 | neutral | N | 0.510586158 | None | None | I |
R/H | 0.1244 | likely_benign | 0.146 | benign | -1.238 | Destabilizing | 0.968 | D | 0.359 | neutral | None | None | None | None | I |
R/I | 0.1009 | likely_benign | 0.1362 | benign | 0.081 | Stabilizing | 0.002 | N | 0.207 | neutral | None | None | None | None | I |
R/K | 0.0974 | likely_benign | 0.1079 | benign | -0.577 | Destabilizing | 0.468 | N | 0.28 | neutral | N | 0.449847546 | None | None | I |
R/L | 0.1277 | likely_benign | 0.1572 | benign | 0.081 | Stabilizing | 0.001 | N | 0.191 | neutral | None | None | None | None | I |
R/M | 0.1542 | likely_benign | 0.1894 | benign | -0.203 | Destabilizing | 0.786 | D | 0.445 | neutral | N | 0.511551841 | None | None | I |
R/N | 0.3881 | ambiguous | 0.4416 | ambiguous | -0.075 | Destabilizing | 0.738 | D | 0.355 | neutral | None | None | None | None | I |
R/P | 0.2204 | likely_benign | 0.2347 | benign | -0.121 | Destabilizing | 0.896 | D | 0.519 | neutral | None | None | None | None | I |
R/Q | 0.1043 | likely_benign | 0.1183 | benign | -0.271 | Destabilizing | 0.896 | D | 0.39 | neutral | None | None | None | None | I |
R/S | 0.2821 | likely_benign | 0.3321 | benign | -0.75 | Destabilizing | 0.178 | N | 0.359 | neutral | N | 0.487810275 | None | None | I |
R/T | 0.1302 | likely_benign | 0.1622 | benign | -0.499 | Destabilizing | 0.002 | N | 0.201 | neutral | N | 0.411410825 | None | None | I |
R/V | 0.1356 | likely_benign | 0.1746 | benign | -0.121 | Destabilizing | 0.001 | N | 0.207 | neutral | None | None | None | None | I |
R/W | 0.2089 | likely_benign | 0.2421 | benign | -0.429 | Destabilizing | 0.988 | D | 0.439 | neutral | N | 0.512448086 | None | None | I |
R/Y | 0.3039 | likely_benign | 0.3443 | ambiguous | -0.092 | Destabilizing | 0.738 | D | 0.505 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.