Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15995 | 48208;48209;48210 | chr2:178616906;178616905;178616904 | chr2:179481633;179481632;179481631 |
N2AB | 14354 | 43285;43286;43287 | chr2:178616906;178616905;178616904 | chr2:179481633;179481632;179481631 |
N2A | 13427 | 40504;40505;40506 | chr2:178616906;178616905;178616904 | chr2:179481633;179481632;179481631 |
N2B | 6930 | 21013;21014;21015 | chr2:178616906;178616905;178616904 | chr2:179481633;179481632;179481631 |
Novex-1 | 7055 | 21388;21389;21390 | chr2:178616906;178616905;178616904 | chr2:179481633;179481632;179481631 |
Novex-2 | 7122 | 21589;21590;21591 | chr2:178616906;178616905;178616904 | chr2:179481633;179481632;179481631 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1205858771 | -0.007 | 0.035 | N | 0.592 | 0.186 | 0.514015564596 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.68161E-04 | None | 0 | None | 0 | 0 | 0 |
T/I | rs1205858771 | -0.007 | 0.035 | N | 0.592 | 0.186 | 0.514015564596 | gnomAD-4.0.0 | 4.78025E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 8.34307E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1068 | likely_benign | 0.1069 | benign | -0.943 | Destabilizing | 0.042 | N | 0.449 | neutral | D | 0.531111131 | None | None | N |
T/C | 0.4643 | ambiguous | 0.4591 | ambiguous | -0.483 | Destabilizing | 0.883 | D | 0.582 | neutral | None | None | None | None | N |
T/D | 0.4557 | ambiguous | 0.443 | ambiguous | -0.417 | Destabilizing | 0.22 | N | 0.594 | neutral | None | None | None | None | N |
T/E | 0.2711 | likely_benign | 0.268 | benign | -0.355 | Destabilizing | 0.22 | N | 0.57 | neutral | None | None | None | None | N |
T/F | 0.2808 | likely_benign | 0.2683 | benign | -0.799 | Destabilizing | 0.497 | N | 0.599 | neutral | None | None | None | None | N |
T/G | 0.3674 | ambiguous | 0.3553 | ambiguous | -1.272 | Destabilizing | None | N | 0.431 | neutral | None | None | None | None | N |
T/H | 0.2178 | likely_benign | 0.2119 | benign | -1.487 | Destabilizing | 0.859 | D | 0.588 | neutral | None | None | None | None | N |
T/I | 0.1516 | likely_benign | 0.1545 | benign | -0.135 | Destabilizing | 0.035 | N | 0.592 | neutral | N | 0.513317294 | None | None | N |
T/K | 0.1399 | likely_benign | 0.1427 | benign | -0.771 | Destabilizing | 0.002 | N | 0.292 | neutral | None | None | None | None | N |
T/L | 0.1198 | likely_benign | 0.1251 | benign | -0.135 | Destabilizing | 0.055 | N | 0.562 | neutral | None | None | None | None | N |
T/M | 0.1291 | likely_benign | 0.128 | benign | 0.065 | Stabilizing | 0.497 | N | 0.609 | neutral | None | None | None | None | N |
T/N | 0.156 | likely_benign | 0.1559 | benign | -0.858 | Destabilizing | 0.175 | N | 0.533 | neutral | D | 0.615108537 | None | None | N |
T/P | 0.6472 | likely_pathogenic | 0.6288 | pathogenic | -0.371 | Destabilizing | 0.822 | D | 0.631 | neutral | D | 0.616812191 | None | None | N |
T/Q | 0.1933 | likely_benign | 0.1893 | benign | -0.867 | Destabilizing | 0.497 | N | 0.63 | neutral | None | None | None | None | N |
T/R | 0.1248 | likely_benign | 0.1265 | benign | -0.675 | Destabilizing | 0.004 | N | 0.37 | neutral | None | None | None | None | N |
T/S | 0.1184 | likely_benign | 0.1148 | benign | -1.134 | Destabilizing | 0.081 | N | 0.579 | neutral | N | 0.499095223 | None | None | N |
T/V | 0.1309 | likely_benign | 0.1359 | benign | -0.371 | Destabilizing | 0.001 | N | 0.226 | neutral | None | None | None | None | N |
T/W | 0.6562 | likely_pathogenic | 0.6246 | pathogenic | -0.798 | Destabilizing | 0.958 | D | 0.609 | neutral | None | None | None | None | N |
T/Y | 0.2939 | likely_benign | 0.2874 | benign | -0.551 | Destabilizing | 0.667 | D | 0.601 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.