Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16001 | 48226;48227;48228 | chr2:178616888;178616887;178616886 | chr2:179481615;179481614;179481613 |
N2AB | 14360 | 43303;43304;43305 | chr2:178616888;178616887;178616886 | chr2:179481615;179481614;179481613 |
N2A | 13433 | 40522;40523;40524 | chr2:178616888;178616887;178616886 | chr2:179481615;179481614;179481613 |
N2B | 6936 | 21031;21032;21033 | chr2:178616888;178616887;178616886 | chr2:179481615;179481614;179481613 |
Novex-1 | 7061 | 21406;21407;21408 | chr2:178616888;178616887;178616886 | chr2:179481615;179481614;179481613 |
Novex-2 | 7128 | 21607;21608;21609 | chr2:178616888;178616887;178616886 | chr2:179481615;179481614;179481613 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | None | N | 0.197 | 0.186 | 0.273938319068 | gnomAD-4.0.0 | 6.8462E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99866E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2153 | likely_benign | 0.2142 | benign | -0.102 | Destabilizing | 0.035 | N | 0.34 | neutral | None | None | None | None | N |
K/C | 0.5954 | likely_pathogenic | 0.5976 | pathogenic | -0.316 | Destabilizing | 0.935 | D | 0.333 | neutral | None | None | None | None | N |
K/D | 0.2841 | likely_benign | 0.2825 | benign | 0.146 | Stabilizing | 0.081 | N | 0.34 | neutral | None | None | None | None | N |
K/E | 0.1055 | likely_benign | 0.1079 | benign | 0.193 | Stabilizing | 0.027 | N | 0.362 | neutral | N | 0.503463507 | None | None | N |
K/F | 0.7167 | likely_pathogenic | 0.7052 | pathogenic | -0.136 | Destabilizing | 0.555 | D | 0.331 | neutral | None | None | None | None | N |
K/G | 0.3448 | ambiguous | 0.3289 | benign | -0.354 | Destabilizing | 0.081 | N | 0.347 | neutral | None | None | None | None | N |
K/H | 0.2329 | likely_benign | 0.2441 | benign | -0.576 | Destabilizing | 0.38 | N | 0.32 | neutral | None | None | None | None | N |
K/I | 0.2764 | likely_benign | 0.2816 | benign | 0.499 | Stabilizing | 0.317 | N | 0.356 | neutral | N | 0.514603681 | None | None | N |
K/L | 0.3066 | likely_benign | 0.312 | benign | 0.499 | Stabilizing | 0.081 | N | 0.357 | neutral | None | None | None | None | N |
K/M | 0.1968 | likely_benign | 0.2011 | benign | 0.157 | Stabilizing | 0.555 | D | 0.329 | neutral | None | None | None | None | N |
K/N | 0.1946 | likely_benign | 0.1924 | benign | 0.032 | Stabilizing | None | N | 0.152 | neutral | N | 0.492553404 | None | None | N |
K/P | 0.8728 | likely_pathogenic | 0.8461 | pathogenic | 0.328 | Stabilizing | 0.555 | D | 0.323 | neutral | None | None | None | None | N |
K/Q | 0.1123 | likely_benign | 0.1143 | benign | -0.054 | Destabilizing | None | N | 0.163 | neutral | N | 0.468169833 | None | None | N |
K/R | 0.088 | likely_benign | 0.0901 | benign | -0.146 | Destabilizing | 0.062 | N | 0.306 | neutral | N | 0.510009861 | None | None | N |
K/S | 0.231 | likely_benign | 0.2255 | benign | -0.485 | Destabilizing | 0.035 | N | 0.315 | neutral | None | None | None | None | N |
K/T | 0.0919 | likely_benign | 0.0935 | benign | -0.266 | Destabilizing | None | N | 0.197 | neutral | N | 0.515456717 | None | None | N |
K/V | 0.2225 | likely_benign | 0.2287 | benign | 0.328 | Stabilizing | 0.081 | N | 0.373 | neutral | None | None | None | None | N |
K/W | 0.7642 | likely_pathogenic | 0.7505 | pathogenic | -0.138 | Destabilizing | 0.935 | D | 0.359 | neutral | None | None | None | None | N |
K/Y | 0.5657 | likely_pathogenic | 0.5604 | ambiguous | 0.195 | Stabilizing | 0.555 | D | 0.328 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.