Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16002 | 48229;48230;48231 | chr2:178616885;178616884;178616883 | chr2:179481612;179481611;179481610 |
N2AB | 14361 | 43306;43307;43308 | chr2:178616885;178616884;178616883 | chr2:179481612;179481611;179481610 |
N2A | 13434 | 40525;40526;40527 | chr2:178616885;178616884;178616883 | chr2:179481612;179481611;179481610 |
N2B | 6937 | 21034;21035;21036 | chr2:178616885;178616884;178616883 | chr2:179481612;179481611;179481610 |
Novex-1 | 7062 | 21409;21410;21411 | chr2:178616885;178616884;178616883 | chr2:179481612;179481611;179481610 |
Novex-2 | 7129 | 21610;21611;21612 | chr2:178616885;178616884;178616883 | chr2:179481612;179481611;179481610 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.001 | N | 0.095 | 0.082 | 0.468168183122 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1409 | likely_benign | 0.1375 | benign | -0.687 | Destabilizing | 0.001 | N | 0.095 | neutral | N | 0.505806433 | None | None | N |
V/C | 0.6028 | likely_pathogenic | 0.5823 | pathogenic | -0.545 | Destabilizing | 0.958 | D | 0.372 | neutral | None | None | None | None | N |
V/D | 0.2015 | likely_benign | 0.1789 | benign | -0.601 | Destabilizing | 0.124 | N | 0.391 | neutral | None | None | None | None | N |
V/E | 0.1392 | likely_benign | 0.1314 | benign | -0.715 | Destabilizing | None | N | 0.175 | neutral | N | 0.44950345 | None | None | N |
V/F | 0.1685 | likely_benign | 0.1498 | benign | -0.875 | Destabilizing | 0.331 | N | 0.393 | neutral | None | None | None | None | N |
V/G | 0.1834 | likely_benign | 0.1684 | benign | -0.847 | Destabilizing | 0.096 | N | 0.384 | neutral | D | 0.540318682 | None | None | N |
V/H | 0.3743 | ambiguous | 0.3432 | ambiguous | -0.46 | Destabilizing | 0.667 | D | 0.373 | neutral | None | None | None | None | N |
V/I | 0.081 | likely_benign | 0.0832 | benign | -0.406 | Destabilizing | 0.042 | N | 0.338 | neutral | N | 0.510326482 | None | None | N |
V/K | 0.1631 | likely_benign | 0.1514 | benign | -0.615 | Destabilizing | 0.124 | N | 0.367 | neutral | None | None | None | None | N |
V/L | 0.1556 | likely_benign | 0.1417 | benign | -0.406 | Destabilizing | 0.001 | N | 0.109 | neutral | N | 0.508829464 | None | None | N |
V/M | 0.1338 | likely_benign | 0.1283 | benign | -0.306 | Destabilizing | 0.497 | N | 0.388 | neutral | None | None | None | None | N |
V/N | 0.1487 | likely_benign | 0.1392 | benign | -0.265 | Destabilizing | 0.497 | N | 0.399 | neutral | None | None | None | None | N |
V/P | 0.2191 | likely_benign | 0.1982 | benign | -0.464 | Destabilizing | 0.667 | D | 0.38 | neutral | None | None | None | None | N |
V/Q | 0.1807 | likely_benign | 0.1708 | benign | -0.551 | Destabilizing | 0.331 | N | 0.382 | neutral | None | None | None | None | N |
V/R | 0.1855 | likely_benign | 0.1679 | benign | -0.04 | Destabilizing | 0.497 | N | 0.404 | neutral | None | None | None | None | N |
V/S | 0.1505 | likely_benign | 0.1396 | benign | -0.613 | Destabilizing | 0.011 | N | 0.197 | neutral | None | None | None | None | N |
V/T | 0.1344 | likely_benign | 0.1311 | benign | -0.631 | Destabilizing | 0.055 | N | 0.273 | neutral | None | None | None | None | N |
V/W | 0.7362 | likely_pathogenic | 0.6885 | pathogenic | -0.958 | Destabilizing | 0.958 | D | 0.429 | neutral | None | None | None | None | N |
V/Y | 0.3996 | ambiguous | 0.3634 | ambiguous | -0.668 | Destabilizing | 0.667 | D | 0.386 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.