Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16004 | 48235;48236;48237 | chr2:178616879;178616878;178616877 | chr2:179481606;179481605;179481604 |
N2AB | 14363 | 43312;43313;43314 | chr2:178616879;178616878;178616877 | chr2:179481606;179481605;179481604 |
N2A | 13436 | 40531;40532;40533 | chr2:178616879;178616878;178616877 | chr2:179481606;179481605;179481604 |
N2B | 6939 | 21040;21041;21042 | chr2:178616879;178616878;178616877 | chr2:179481606;179481605;179481604 |
Novex-1 | 7064 | 21415;21416;21417 | chr2:178616879;178616878;178616877 | chr2:179481606;179481605;179481604 |
Novex-2 | 7131 | 21616;21617;21618 | chr2:178616879;178616878;178616877 | chr2:179481606;179481605;179481604 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs1305953554 | 0.409 | 0.712 | N | 0.352 | 0.084 | 0.286465849087 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.49E-05 | 0 |
E/Q | rs1305953554 | 0.409 | 0.712 | N | 0.352 | 0.084 | 0.286465849087 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.95E-05 | 0 | 0 |
E/Q | rs1305953554 | 0.409 | 0.712 | N | 0.352 | 0.084 | 0.286465849087 | gnomAD-4.0.0 | 1.31673E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.94525E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.124 | likely_benign | 0.1309 | benign | -0.021 | Destabilizing | 0.002 | N | 0.165 | neutral | N | 0.50574142 | None | None | N |
E/C | 0.6904 | likely_pathogenic | 0.7161 | pathogenic | -0.296 | Destabilizing | 0.977 | D | 0.329 | neutral | None | None | None | None | N |
E/D | 0.123 | likely_benign | 0.1272 | benign | -0.36 | Destabilizing | 0.201 | N | 0.343 | neutral | N | 0.511704312 | None | None | N |
E/F | 0.6632 | likely_pathogenic | 0.6705 | pathogenic | 0.024 | Stabilizing | 0.92 | D | 0.339 | neutral | None | None | None | None | N |
E/G | 0.1139 | likely_benign | 0.1151 | benign | -0.157 | Destabilizing | 0.201 | N | 0.34 | neutral | D | 0.540020377 | None | None | N |
E/H | 0.3054 | likely_benign | 0.327 | benign | 0.655 | Stabilizing | 0.92 | D | 0.366 | neutral | None | None | None | None | N |
E/I | 0.3278 | likely_benign | 0.3493 | ambiguous | 0.285 | Stabilizing | 0.85 | D | 0.326 | neutral | None | None | None | None | N |
E/K | 0.1081 | likely_benign | 0.1138 | benign | 0.383 | Stabilizing | 0.549 | D | 0.32 | neutral | N | 0.492368927 | None | None | N |
E/L | 0.3021 | likely_benign | 0.3141 | benign | 0.285 | Stabilizing | 0.447 | N | 0.363 | neutral | None | None | None | None | N |
E/M | 0.3744 | ambiguous | 0.387 | ambiguous | -0.018 | Destabilizing | 0.977 | D | 0.325 | neutral | None | None | None | None | N |
E/N | 0.1944 | likely_benign | 0.2017 | benign | 0.034 | Stabilizing | 0.021 | N | 0.206 | neutral | None | None | None | None | N |
E/P | 0.2794 | likely_benign | 0.3081 | benign | 0.202 | Stabilizing | 0.92 | D | 0.359 | neutral | None | None | None | None | N |
E/Q | 0.1057 | likely_benign | 0.1118 | benign | 0.066 | Stabilizing | 0.712 | D | 0.352 | neutral | N | 0.508366775 | None | None | N |
E/R | 0.1855 | likely_benign | 0.1938 | benign | 0.68 | Stabilizing | 0.617 | D | 0.336 | neutral | None | None | None | None | N |
E/S | 0.1498 | likely_benign | 0.1571 | benign | -0.085 | Destabilizing | 0.25 | N | 0.345 | neutral | None | None | None | None | N |
E/T | 0.1509 | likely_benign | 0.1611 | benign | 0.037 | Stabilizing | 0.002 | N | 0.161 | neutral | None | None | None | None | N |
E/V | 0.1681 | likely_benign | 0.1809 | benign | 0.202 | Stabilizing | 0.379 | N | 0.353 | neutral | N | 0.510022535 | None | None | N |
E/W | 0.8183 | likely_pathogenic | 0.8267 | pathogenic | 0.092 | Stabilizing | 0.992 | D | 0.398 | neutral | None | None | None | None | N |
E/Y | 0.508 | ambiguous | 0.5308 | ambiguous | 0.252 | Stabilizing | 0.972 | D | 0.339 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.