Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16007 | 48244;48245;48246 | chr2:178616870;178616869;178616868 | chr2:179481597;179481596;179481595 |
N2AB | 14366 | 43321;43322;43323 | chr2:178616870;178616869;178616868 | chr2:179481597;179481596;179481595 |
N2A | 13439 | 40540;40541;40542 | chr2:178616870;178616869;178616868 | chr2:179481597;179481596;179481595 |
N2B | 6942 | 21049;21050;21051 | chr2:178616870;178616869;178616868 | chr2:179481597;179481596;179481595 |
Novex-1 | 7067 | 21424;21425;21426 | chr2:178616870;178616869;178616868 | chr2:179481597;179481596;179481595 |
Novex-2 | 7134 | 21625;21626;21627 | chr2:178616870;178616869;178616868 | chr2:179481597;179481596;179481595 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | None | None | 0.309 | N | 0.301 | 0.193 | 0.236890367714 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
D/G | None | None | 0.007 | N | 0.231 | 0.156 | 0.154104182512 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1585 | likely_benign | 0.1699 | benign | 0.083 | Stabilizing | 0.309 | N | 0.301 | neutral | N | 0.436280322 | None | None | N |
D/C | 0.5144 | ambiguous | 0.5423 | ambiguous | -0.192 | Destabilizing | 0.996 | D | 0.356 | neutral | None | None | None | None | N |
D/E | 0.1164 | likely_benign | 0.1242 | benign | -0.436 | Destabilizing | 0.003 | N | 0.149 | neutral | N | 0.434530289 | None | None | N |
D/F | 0.557 | ambiguous | 0.5607 | ambiguous | -0.074 | Destabilizing | 0.02 | N | 0.351 | neutral | None | None | None | None | N |
D/G | 0.1343 | likely_benign | 0.1421 | benign | 0.003 | Stabilizing | 0.007 | N | 0.231 | neutral | N | 0.436987728 | None | None | N |
D/H | 0.2338 | likely_benign | 0.2515 | benign | 0.57 | Stabilizing | 0.939 | D | 0.289 | neutral | N | 0.452808236 | None | None | N |
D/I | 0.3468 | ambiguous | 0.3626 | ambiguous | 0.223 | Stabilizing | 0.835 | D | 0.34 | neutral | None | None | None | None | N |
D/K | 0.2093 | likely_benign | 0.2372 | benign | 0.394 | Stabilizing | 0.59 | D | 0.277 | neutral | None | None | None | None | N |
D/L | 0.3051 | likely_benign | 0.3304 | benign | 0.223 | Stabilizing | 0.59 | D | 0.346 | neutral | None | None | None | None | N |
D/M | 0.5562 | ambiguous | 0.5794 | pathogenic | -0.009 | Destabilizing | 0.987 | D | 0.327 | neutral | None | None | None | None | N |
D/N | 0.0988 | likely_benign | 0.1015 | benign | 0.192 | Stabilizing | 0.684 | D | 0.319 | neutral | N | 0.453580143 | None | None | N |
D/P | 0.338 | likely_benign | 0.3599 | ambiguous | 0.194 | Stabilizing | 0.953 | D | 0.311 | neutral | None | None | None | None | N |
D/Q | 0.2418 | likely_benign | 0.2621 | benign | 0.177 | Stabilizing | 0.835 | D | 0.274 | neutral | None | None | None | None | N |
D/R | 0.2874 | likely_benign | 0.3062 | benign | 0.591 | Stabilizing | 0.91 | D | 0.335 | neutral | None | None | None | None | N |
D/S | 0.1039 | likely_benign | 0.1116 | benign | 0.107 | Stabilizing | 0.742 | D | 0.247 | neutral | None | None | None | None | N |
D/T | 0.2147 | likely_benign | 0.2338 | benign | 0.179 | Stabilizing | 0.742 | D | 0.33 | neutral | None | None | None | None | N |
D/V | 0.2082 | likely_benign | 0.2198 | benign | 0.194 | Stabilizing | 0.684 | D | 0.36 | neutral | N | 0.521800076 | None | None | N |
D/W | 0.7889 | likely_pathogenic | 0.7959 | pathogenic | -0.073 | Destabilizing | 0.996 | D | 0.359 | neutral | None | None | None | None | N |
D/Y | 0.2337 | likely_benign | 0.2367 | benign | 0.138 | Stabilizing | 0.792 | D | 0.343 | neutral | N | 0.52073822 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.