Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16014 | 48265;48266;48267 | chr2:178616849;178616848;178616847 | chr2:179481576;179481575;179481574 |
N2AB | 14373 | 43342;43343;43344 | chr2:178616849;178616848;178616847 | chr2:179481576;179481575;179481574 |
N2A | 13446 | 40561;40562;40563 | chr2:178616849;178616848;178616847 | chr2:179481576;179481575;179481574 |
N2B | 6949 | 21070;21071;21072 | chr2:178616849;178616848;178616847 | chr2:179481576;179481575;179481574 |
Novex-1 | 7074 | 21445;21446;21447 | chr2:178616849;178616848;178616847 | chr2:179481576;179481575;179481574 |
Novex-2 | 7141 | 21646;21647;21648 | chr2:178616849;178616848;178616847 | chr2:179481576;179481575;179481574 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | None | N | 0.183 | 0.137 | 0.634102980643 | gnomAD-4.0.0 | 7.20193E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.87501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1167 | likely_benign | 0.126 | benign | -1.265 | Destabilizing | 0.007 | N | 0.292 | neutral | None | None | None | None | N |
L/C | 0.3246 | likely_benign | 0.3487 | ambiguous | -0.882 | Destabilizing | 0.628 | D | 0.339 | neutral | None | None | None | None | N |
L/D | 0.2757 | likely_benign | 0.3282 | benign | -0.465 | Destabilizing | 0.038 | N | 0.363 | neutral | None | None | None | None | N |
L/E | 0.1672 | likely_benign | 0.1922 | benign | -0.487 | Destabilizing | 0.031 | N | 0.3 | neutral | None | None | None | None | N |
L/F | 0.1059 | likely_benign | 0.1169 | benign | -0.903 | Destabilizing | 0.171 | N | 0.271 | neutral | N | 0.490068566 | None | None | N |
L/G | 0.214 | likely_benign | 0.2596 | benign | -1.532 | Destabilizing | 0.016 | N | 0.305 | neutral | None | None | None | None | N |
L/H | 0.1176 | likely_benign | 0.1329 | benign | -0.605 | Destabilizing | 0.356 | N | 0.413 | neutral | None | None | None | None | N |
L/I | 0.0935 | likely_benign | 0.0739 | benign | -0.636 | Destabilizing | None | N | 0.14 | neutral | None | None | None | None | N |
L/K | 0.1099 | likely_benign | 0.1289 | benign | -0.795 | Destabilizing | None | N | 0.13 | neutral | None | None | None | None | N |
L/M | 0.1056 | likely_benign | 0.1029 | benign | -0.582 | Destabilizing | 0.171 | N | 0.284 | neutral | N | 0.508906 | None | None | N |
L/N | 0.1189 | likely_benign | 0.1337 | benign | -0.684 | Destabilizing | None | N | 0.256 | neutral | None | None | None | None | N |
L/P | 0.3887 | ambiguous | 0.4268 | ambiguous | -0.813 | Destabilizing | 0.136 | N | 0.457 | neutral | None | None | None | None | N |
L/Q | 0.0889 | likely_benign | 0.1024 | benign | -0.845 | Destabilizing | 0.072 | N | 0.457 | neutral | None | None | None | None | N |
L/R | 0.1029 | likely_benign | 0.1185 | benign | -0.197 | Destabilizing | None | N | 0.261 | neutral | None | None | None | None | N |
L/S | 0.0941 | likely_benign | 0.1225 | benign | -1.274 | Destabilizing | None | N | 0.183 | neutral | N | 0.443332652 | None | None | N |
L/T | 0.0891 | likely_benign | 0.0959 | benign | -1.174 | Destabilizing | None | N | 0.184 | neutral | None | None | None | None | N |
L/V | 0.0788 | likely_benign | 0.0714 | benign | -0.813 | Destabilizing | 0.002 | N | 0.189 | neutral | N | 0.496344309 | None | None | N |
L/W | 0.236 | likely_benign | 0.2757 | benign | -0.924 | Destabilizing | 0.828 | D | 0.395 | neutral | N | 0.509452657 | None | None | N |
L/Y | 0.235 | likely_benign | 0.2554 | benign | -0.704 | Destabilizing | 0.356 | N | 0.407 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.