Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16016 | 48271;48272;48273 | chr2:178616843;178616842;178616841 | chr2:179481570;179481569;179481568 |
N2AB | 14375 | 43348;43349;43350 | chr2:178616843;178616842;178616841 | chr2:179481570;179481569;179481568 |
N2A | 13448 | 40567;40568;40569 | chr2:178616843;178616842;178616841 | chr2:179481570;179481569;179481568 |
N2B | 6951 | 21076;21077;21078 | chr2:178616843;178616842;178616841 | chr2:179481570;179481569;179481568 |
Novex-1 | 7076 | 21451;21452;21453 | chr2:178616843;178616842;178616841 | chr2:179481570;179481569;179481568 |
Novex-2 | 7143 | 21652;21653;21654 | chr2:178616843;178616842;178616841 | chr2:179481570;179481569;179481568 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.046 | N | 0.147 | 0.112 | 0.271763555656 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4168 | ambiguous | 0.4317 | ambiguous | -0.874 | Destabilizing | 0.999 | D | 0.539 | neutral | None | None | None | None | N |
A/D | 0.3114 | likely_benign | 0.4035 | ambiguous | -0.077 | Destabilizing | 0.968 | D | 0.635 | neutral | N | 0.437569351 | None | None | N |
A/E | 0.2985 | likely_benign | 0.3881 | ambiguous | -0.168 | Destabilizing | 0.919 | D | 0.533 | neutral | None | None | None | None | N |
A/F | 0.4539 | ambiguous | 0.4976 | ambiguous | -0.909 | Destabilizing | 0.988 | D | 0.691 | prob.neutral | None | None | None | None | N |
A/G | 0.1523 | likely_benign | 0.172 | benign | -0.711 | Destabilizing | 0.811 | D | 0.425 | neutral | N | 0.481305799 | None | None | N |
A/H | 0.4542 | ambiguous | 0.5031 | ambiguous | -0.745 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
A/I | 0.3577 | ambiguous | 0.4032 | ambiguous | -0.321 | Destabilizing | 0.976 | D | 0.546 | neutral | None | None | None | None | N |
A/K | 0.4131 | ambiguous | 0.4918 | ambiguous | -0.687 | Destabilizing | 0.919 | D | 0.531 | neutral | None | None | None | None | N |
A/L | 0.255 | likely_benign | 0.2909 | benign | -0.321 | Destabilizing | 0.851 | D | 0.51 | neutral | None | None | None | None | N |
A/M | 0.3345 | likely_benign | 0.3697 | ambiguous | -0.404 | Destabilizing | 0.999 | D | 0.586 | neutral | None | None | None | None | N |
A/N | 0.2391 | likely_benign | 0.2697 | benign | -0.405 | Destabilizing | 0.976 | D | 0.635 | neutral | None | None | None | None | N |
A/P | 0.3408 | ambiguous | 0.3585 | ambiguous | -0.361 | Destabilizing | 0.984 | D | 0.559 | neutral | N | 0.51597344 | None | None | N |
A/Q | 0.3497 | ambiguous | 0.3898 | ambiguous | -0.569 | Destabilizing | 0.988 | D | 0.597 | neutral | None | None | None | None | N |
A/R | 0.3502 | ambiguous | 0.4196 | ambiguous | -0.371 | Destabilizing | 0.976 | D | 0.587 | neutral | None | None | None | None | N |
A/S | 0.0928 | likely_benign | 0.0974 | benign | -0.787 | Destabilizing | 0.103 | N | 0.187 | neutral | N | 0.491258547 | None | None | N |
A/T | 0.0967 | likely_benign | 0.1113 | benign | -0.768 | Destabilizing | 0.046 | N | 0.147 | neutral | N | 0.389967517 | None | None | N |
A/V | 0.1891 | likely_benign | 0.2171 | benign | -0.361 | Destabilizing | 0.811 | D | 0.451 | neutral | N | 0.500175168 | None | None | N |
A/W | 0.7398 | likely_pathogenic | 0.7771 | pathogenic | -1.099 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
A/Y | 0.4691 | ambiguous | 0.5093 | ambiguous | -0.721 | Destabilizing | 0.996 | D | 0.7 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.