Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16035 | 48328;48329;48330 | chr2:178616786;178616785;178616784 | chr2:179481513;179481512;179481511 |
N2AB | 14394 | 43405;43406;43407 | chr2:178616786;178616785;178616784 | chr2:179481513;179481512;179481511 |
N2A | 13467 | 40624;40625;40626 | chr2:178616786;178616785;178616784 | chr2:179481513;179481512;179481511 |
N2B | 6970 | 21133;21134;21135 | chr2:178616786;178616785;178616784 | chr2:179481513;179481512;179481511 |
Novex-1 | 7095 | 21508;21509;21510 | chr2:178616786;178616785;178616784 | chr2:179481513;179481512;179481511 |
Novex-2 | 7162 | 21709;21710;21711 | chr2:178616786;178616785;178616784 | chr2:179481513;179481512;179481511 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs371209083 | -0.804 | 0.898 | N | 0.705 | 0.148 | None | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
L/V | rs371209083 | -0.804 | 0.898 | N | 0.705 | 0.148 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.95E-05 | 0 | 0 |
L/V | rs371209083 | -0.804 | 0.898 | N | 0.705 | 0.148 | None | gnomAD-4.0.0 | 5.13148E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.58589E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9184 | likely_pathogenic | 0.938 | pathogenic | -2.373 | Highly Destabilizing | 0.983 | D | 0.763 | deleterious | None | None | None | None | N |
L/C | 0.8681 | likely_pathogenic | 0.8867 | pathogenic | -1.835 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
L/D | 0.9994 | likely_pathogenic | 0.9996 | pathogenic | -2.038 | Highly Destabilizing | 0.999 | D | 0.895 | deleterious | None | None | None | None | N |
L/E | 0.9936 | likely_pathogenic | 0.9958 | pathogenic | -1.848 | Destabilizing | 0.999 | D | 0.872 | deleterious | None | None | None | None | N |
L/F | 0.6698 | likely_pathogenic | 0.7368 | pathogenic | -1.475 | Destabilizing | 0.995 | D | 0.791 | deleterious | None | None | None | None | N |
L/G | 0.9869 | likely_pathogenic | 0.9907 | pathogenic | -2.904 | Highly Destabilizing | 0.999 | D | 0.868 | deleterious | None | None | None | None | N |
L/H | 0.9886 | likely_pathogenic | 0.9929 | pathogenic | -2.252 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
L/I | 0.1293 | likely_benign | 0.1511 | benign | -0.866 | Destabilizing | 0.289 | N | 0.375 | neutral | None | None | None | None | N |
L/K | 0.9874 | likely_pathogenic | 0.9914 | pathogenic | -1.635 | Destabilizing | 0.998 | D | 0.869 | deleterious | None | None | None | None | N |
L/M | 0.3057 | likely_benign | 0.356 | ambiguous | -0.866 | Destabilizing | 0.993 | D | 0.765 | deleterious | D | 0.546260396 | None | None | N |
L/N | 0.9944 | likely_pathogenic | 0.9959 | pathogenic | -1.83 | Destabilizing | 0.999 | D | 0.896 | deleterious | None | None | None | None | N |
L/P | 0.9923 | likely_pathogenic | 0.9951 | pathogenic | -1.345 | Destabilizing | 0.999 | D | 0.896 | deleterious | D | 0.58705554 | None | None | N |
L/Q | 0.9735 | likely_pathogenic | 0.9822 | pathogenic | -1.735 | Destabilizing | 1.0 | D | 0.895 | deleterious | D | 0.58705554 | None | None | N |
L/R | 0.9754 | likely_pathogenic | 0.9832 | pathogenic | -1.36 | Destabilizing | 0.999 | D | 0.891 | deleterious | D | 0.58705554 | None | None | N |
L/S | 0.9894 | likely_pathogenic | 0.9929 | pathogenic | -2.651 | Highly Destabilizing | 0.998 | D | 0.875 | deleterious | None | None | None | None | N |
L/T | 0.9558 | likely_pathogenic | 0.9696 | pathogenic | -2.302 | Highly Destabilizing | 0.995 | D | 0.795 | deleterious | None | None | None | None | N |
L/V | 0.1512 | likely_benign | 0.1859 | benign | -1.345 | Destabilizing | 0.898 | D | 0.705 | prob.neutral | N | 0.444991435 | None | None | N |
L/W | 0.9542 | likely_pathogenic | 0.9728 | pathogenic | -1.726 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
L/Y | 0.9622 | likely_pathogenic | 0.9757 | pathogenic | -1.455 | Destabilizing | 0.999 | D | 0.834 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.