Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16041 | 48346;48347;48348 | chr2:178616768;178616767;178616766 | chr2:179481495;179481494;179481493 |
N2AB | 14400 | 43423;43424;43425 | chr2:178616768;178616767;178616766 | chr2:179481495;179481494;179481493 |
N2A | 13473 | 40642;40643;40644 | chr2:178616768;178616767;178616766 | chr2:179481495;179481494;179481493 |
N2B | 6976 | 21151;21152;21153 | chr2:178616768;178616767;178616766 | chr2:179481495;179481494;179481493 |
Novex-1 | 7101 | 21526;21527;21528 | chr2:178616768;178616767;178616766 | chr2:179481495;179481494;179481493 |
Novex-2 | 7168 | 21727;21728;21729 | chr2:178616768;178616767;178616766 | chr2:179481495;179481494;179481493 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs2057419029 | None | 0.781 | D | 0.61 | 0.328 | 0.578523416491 | gnomAD-4.0.0 | 1.36929E-06 | None | None | None | None | I | None | 2.99455E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99879E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3067 | likely_benign | 0.3038 | benign | -0.332 | Destabilizing | 0.002 | N | 0.504 | neutral | N | 0.494019539 | None | None | I |
V/C | 0.7158 | likely_pathogenic | 0.702 | pathogenic | -0.767 | Destabilizing | 0.947 | D | 0.63 | neutral | None | None | None | None | I |
V/D | 0.5552 | ambiguous | 0.5407 | ambiguous | -0.361 | Destabilizing | 0.7 | D | 0.678 | prob.neutral | None | None | None | None | I |
V/E | 0.4019 | ambiguous | 0.4011 | ambiguous | -0.477 | Destabilizing | 0.638 | D | 0.647 | neutral | D | 0.551204473 | None | None | I |
V/F | 0.2348 | likely_benign | 0.2167 | benign | -0.721 | Destabilizing | 0.826 | D | 0.616 | neutral | None | None | None | None | I |
V/G | 0.2746 | likely_benign | 0.2889 | benign | -0.389 | Destabilizing | 0.468 | N | 0.6 | neutral | D | 0.591736491 | None | None | I |
V/H | 0.6798 | likely_pathogenic | 0.6544 | pathogenic | 0.004 | Stabilizing | 0.982 | D | 0.685 | prob.neutral | None | None | None | None | I |
V/I | 0.1083 | likely_benign | 0.0973 | benign | -0.321 | Destabilizing | 0.009 | N | 0.499 | neutral | None | None | None | None | I |
V/K | 0.5117 | ambiguous | 0.4832 | ambiguous | -0.384 | Destabilizing | 0.7 | D | 0.647 | neutral | None | None | None | None | I |
V/L | 0.3395 | likely_benign | 0.3102 | benign | -0.321 | Destabilizing | 0.094 | N | 0.598 | neutral | N | 0.509930083 | None | None | I |
V/M | 0.2941 | likely_benign | 0.2564 | benign | -0.563 | Destabilizing | 0.781 | D | 0.61 | neutral | D | 0.551204473 | None | None | I |
V/N | 0.3999 | ambiguous | 0.3758 | ambiguous | -0.168 | Destabilizing | 0.826 | D | 0.682 | prob.neutral | None | None | None | None | I |
V/P | 0.8372 | likely_pathogenic | 0.8365 | pathogenic | -0.297 | Destabilizing | 0.7 | D | 0.656 | neutral | None | None | None | None | I |
V/Q | 0.4495 | ambiguous | 0.4393 | ambiguous | -0.381 | Destabilizing | 0.826 | D | 0.658 | neutral | None | None | None | None | I |
V/R | 0.4379 | ambiguous | 0.4414 | ambiguous | 0.062 | Stabilizing | 0.7 | D | 0.681 | prob.neutral | None | None | None | None | I |
V/S | 0.3365 | likely_benign | 0.3368 | benign | -0.472 | Destabilizing | 0.539 | D | 0.571 | neutral | None | None | None | None | I |
V/T | 0.3383 | likely_benign | 0.3212 | benign | -0.498 | Destabilizing | 0.25 | N | 0.571 | neutral | None | None | None | None | I |
V/W | 0.8732 | likely_pathogenic | 0.8572 | pathogenic | -0.778 | Destabilizing | 0.982 | D | 0.711 | prob.delet. | None | None | None | None | I |
V/Y | 0.5786 | likely_pathogenic | 0.5633 | ambiguous | -0.505 | Destabilizing | 0.826 | D | 0.623 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.