Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16043 | 48352;48353;48354 | chr2:178616762;178616761;178616760 | chr2:179481489;179481488;179481487 |
N2AB | 14402 | 43429;43430;43431 | chr2:178616762;178616761;178616760 | chr2:179481489;179481488;179481487 |
N2A | 13475 | 40648;40649;40650 | chr2:178616762;178616761;178616760 | chr2:179481489;179481488;179481487 |
N2B | 6978 | 21157;21158;21159 | chr2:178616762;178616761;178616760 | chr2:179481489;179481488;179481487 |
Novex-1 | 7103 | 21532;21533;21534 | chr2:178616762;178616761;178616760 | chr2:179481489;179481488;179481487 |
Novex-2 | 7170 | 21733;21734;21735 | chr2:178616762;178616761;178616760 | chr2:179481489;179481488;179481487 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | None | N | 0.133 | 0.072 | 0.0920862733494 | gnomAD-4.0.0 | 1.59361E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.88587E-05 | 0 | 0 | 0 | 0 |
T/I | None | None | 0.055 | N | 0.515 | 0.194 | 0.434716162284 | gnomAD-4.0.0 | 4.78097E-06 | None | None | None | None | I | None | 0 | 4.57854E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02939E-05 |
T/R | rs2057418334 | None | 0.055 | N | 0.497 | 0.2 | 0.573444017615 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 6.57E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/R | rs2057418334 | None | 0.055 | N | 0.497 | 0.2 | 0.573444017615 | gnomAD-4.0.0 | 6.58406E-06 | None | None | None | None | I | None | 0 | 6.56513E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0808 | likely_benign | 0.0778 | benign | -0.467 | Destabilizing | None | N | 0.133 | neutral | N | 0.470801149 | None | None | I |
T/C | 0.3817 | ambiguous | 0.3105 | benign | -0.298 | Destabilizing | 0.356 | N | 0.523 | neutral | None | None | None | None | I |
T/D | 0.3543 | ambiguous | 0.3305 | benign | 0.046 | Stabilizing | 0.038 | N | 0.509 | neutral | None | None | None | None | I |
T/E | 0.236 | likely_benign | 0.221 | benign | -0.015 | Destabilizing | 0.038 | N | 0.495 | neutral | None | None | None | None | I |
T/F | 0.3264 | likely_benign | 0.3043 | benign | -0.8 | Destabilizing | 0.356 | N | 0.646 | neutral | None | None | None | None | I |
T/G | 0.2221 | likely_benign | 0.2137 | benign | -0.638 | Destabilizing | 0.016 | N | 0.623 | neutral | None | None | None | None | I |
T/H | 0.3081 | likely_benign | 0.2806 | benign | -0.946 | Destabilizing | 0.356 | N | 0.625 | neutral | None | None | None | None | I |
T/I | 0.2314 | likely_benign | 0.2185 | benign | -0.127 | Destabilizing | 0.055 | N | 0.515 | neutral | N | 0.499948399 | None | None | I |
T/K | 0.2023 | likely_benign | 0.2001 | benign | -0.544 | Destabilizing | 0.029 | N | 0.492 | neutral | N | 0.444519983 | None | None | I |
T/L | 0.1501 | likely_benign | 0.1423 | benign | -0.127 | Destabilizing | 0.016 | N | 0.493 | neutral | None | None | None | None | I |
T/M | 0.1183 | likely_benign | 0.1056 | benign | 0.079 | Stabilizing | 0.356 | N | 0.531 | neutral | None | None | None | None | I |
T/N | 0.1171 | likely_benign | 0.106 | benign | -0.298 | Destabilizing | 0.038 | N | 0.373 | neutral | None | None | None | None | I |
T/P | 0.2015 | likely_benign | 0.2 | benign | -0.21 | Destabilizing | 0.055 | N | 0.515 | neutral | N | 0.511021556 | None | None | I |
T/Q | 0.2284 | likely_benign | 0.2085 | benign | -0.531 | Destabilizing | 0.214 | N | 0.506 | neutral | None | None | None | None | I |
T/R | 0.1856 | likely_benign | 0.1758 | benign | -0.257 | Destabilizing | 0.055 | N | 0.497 | neutral | N | 0.482959662 | None | None | I |
T/S | 0.1014 | likely_benign | 0.0925 | benign | -0.526 | Destabilizing | None | N | 0.145 | neutral | N | 0.346134392 | None | None | I |
T/V | 0.1592 | likely_benign | 0.1512 | benign | -0.21 | Destabilizing | 0.016 | N | 0.361 | neutral | None | None | None | None | I |
T/W | 0.6636 | likely_pathogenic | 0.6101 | pathogenic | -0.774 | Destabilizing | 0.864 | D | 0.635 | neutral | None | None | None | None | I |
T/Y | 0.3154 | likely_benign | 0.2897 | benign | -0.525 | Destabilizing | 0.356 | N | 0.649 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.