Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16050 | 48373;48374;48375 | chr2:178616741;178616740;178616739 | chr2:179481468;179481467;179481466 |
N2AB | 14409 | 43450;43451;43452 | chr2:178616741;178616740;178616739 | chr2:179481468;179481467;179481466 |
N2A | 13482 | 40669;40670;40671 | chr2:178616741;178616740;178616739 | chr2:179481468;179481467;179481466 |
N2B | 6985 | 21178;21179;21180 | chr2:178616741;178616740;178616739 | chr2:179481468;179481467;179481466 |
Novex-1 | 7110 | 21553;21554;21555 | chr2:178616741;178616740;178616739 | chr2:179481468;179481467;179481466 |
Novex-2 | 7177 | 21754;21755;21756 | chr2:178616741;178616740;178616739 | chr2:179481468;179481467;179481466 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 1.0 | D | 0.857 | 0.526 | 0.715692154805 | gnomAD-4.0.0 | 4.79278E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29919E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9076 | likely_pathogenic | 0.94 | pathogenic | -2.267 | Highly Destabilizing | 0.999 | D | 0.657 | neutral | D | 0.619147926 | None | None | N |
V/C | 0.9605 | likely_pathogenic | 0.9675 | pathogenic | -1.825 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
V/D | 0.9974 | likely_pathogenic | 0.9986 | pathogenic | -3.198 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.620341081 | None | None | N |
V/E | 0.9944 | likely_pathogenic | 0.9963 | pathogenic | -2.939 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
V/F | 0.8995 | likely_pathogenic | 0.906 | pathogenic | -1.365 | Destabilizing | 1.0 | D | 0.834 | deleterious | D | 0.617299527 | None | None | N |
V/G | 0.9443 | likely_pathogenic | 0.9632 | pathogenic | -2.839 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.620341081 | None | None | N |
V/H | 0.9988 | likely_pathogenic | 0.9991 | pathogenic | -2.686 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
V/I | 0.1458 | likely_benign | 0.1456 | benign | -0.64 | Destabilizing | 0.997 | D | 0.561 | neutral | N | 0.450998326 | None | None | N |
V/K | 0.9951 | likely_pathogenic | 0.9962 | pathogenic | -2.015 | Highly Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
V/L | 0.8275 | likely_pathogenic | 0.8318 | pathogenic | -0.64 | Destabilizing | 0.997 | D | 0.673 | neutral | N | 0.428247074 | None | None | N |
V/M | 0.8318 | likely_pathogenic | 0.8522 | pathogenic | -0.728 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
V/N | 0.9932 | likely_pathogenic | 0.9958 | pathogenic | -2.486 | Highly Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
V/P | 0.9961 | likely_pathogenic | 0.9969 | pathogenic | -1.158 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
V/Q | 0.9942 | likely_pathogenic | 0.996 | pathogenic | -2.262 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
V/R | 0.9886 | likely_pathogenic | 0.9918 | pathogenic | -1.873 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
V/S | 0.9807 | likely_pathogenic | 0.9879 | pathogenic | -3.059 | Highly Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
V/T | 0.9283 | likely_pathogenic | 0.9442 | pathogenic | -2.653 | Highly Destabilizing | 0.999 | D | 0.675 | neutral | None | None | None | None | N |
V/W | 0.9986 | likely_pathogenic | 0.9989 | pathogenic | -1.987 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
V/Y | 0.9938 | likely_pathogenic | 0.9944 | pathogenic | -1.592 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.