Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16058 | 48397;48398;48399 | chr2:178616619;178616618;178616617 | chr2:179481346;179481345;179481344 |
N2AB | 14417 | 43474;43475;43476 | chr2:178616619;178616618;178616617 | chr2:179481346;179481345;179481344 |
N2A | 13490 | 40693;40694;40695 | chr2:178616619;178616618;178616617 | chr2:179481346;179481345;179481344 |
N2B | 6993 | 21202;21203;21204 | chr2:178616619;178616618;178616617 | chr2:179481346;179481345;179481344 |
Novex-1 | 7118 | 21577;21578;21579 | chr2:178616619;178616618;178616617 | chr2:179481346;179481345;179481344 |
Novex-2 | 7185 | 21778;21779;21780 | chr2:178616619;178616618;178616617 | chr2:179481346;179481345;179481344 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs767579172 | -0.625 | 0.977 | D | 0.823 | 0.425 | 0.420447328233 | gnomAD-4.0.0 | 2.05454E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80008E-06 | 1.16077E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4813 | ambiguous | 0.545 | ambiguous | -1.246 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
A/D | 0.6158 | likely_pathogenic | 0.6447 | pathogenic | -2.222 | Highly Destabilizing | 0.995 | D | 0.869 | deleterious | None | None | None | None | N |
A/E | 0.3579 | ambiguous | 0.4057 | ambiguous | -2.259 | Highly Destabilizing | 0.993 | D | 0.833 | deleterious | D | 0.553727164 | None | None | N |
A/F | 0.4629 | ambiguous | 0.4984 | ambiguous | -1.293 | Destabilizing | 0.999 | D | 0.886 | deleterious | None | None | None | None | N |
A/G | 0.2147 | likely_benign | 0.2271 | benign | -1.33 | Destabilizing | 0.955 | D | 0.75 | deleterious | D | 0.655165486 | None | None | N |
A/H | 0.6148 | likely_pathogenic | 0.6571 | pathogenic | -1.293 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
A/I | 0.3193 | likely_benign | 0.3772 | ambiguous | -0.65 | Destabilizing | 0.998 | D | 0.837 | deleterious | None | None | None | None | N |
A/K | 0.473 | ambiguous | 0.5035 | ambiguous | -1.279 | Destabilizing | 0.995 | D | 0.83 | deleterious | None | None | None | None | N |
A/L | 0.2769 | likely_benign | 0.3177 | benign | -0.65 | Destabilizing | 0.983 | D | 0.819 | deleterious | None | None | None | None | N |
A/M | 0.3092 | likely_benign | 0.3395 | benign | -0.572 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
A/N | 0.4905 | ambiguous | 0.5318 | ambiguous | -1.17 | Destabilizing | 0.995 | D | 0.876 | deleterious | None | None | None | None | N |
A/P | 0.1627 | likely_benign | 0.1899 | benign | -0.768 | Destabilizing | 0.997 | D | 0.839 | deleterious | N | 0.471905632 | None | None | N |
A/Q | 0.384 | ambiguous | 0.4172 | ambiguous | -1.439 | Destabilizing | 0.998 | D | 0.841 | deleterious | None | None | None | None | N |
A/R | 0.4203 | ambiguous | 0.452 | ambiguous | -0.833 | Destabilizing | 0.995 | D | 0.837 | deleterious | None | None | None | None | N |
A/S | 0.1143 | likely_benign | 0.1153 | benign | -1.406 | Destabilizing | 0.568 | D | 0.493 | neutral | N | 0.481943742 | None | None | N |
A/T | 0.1509 | likely_benign | 0.1687 | benign | -1.375 | Destabilizing | 0.955 | D | 0.775 | deleterious | D | 0.592423311 | None | None | N |
A/V | 0.1711 | likely_benign | 0.1962 | benign | -0.768 | Destabilizing | 0.977 | D | 0.823 | deleterious | D | 0.603153603 | None | None | N |
A/W | 0.8639 | likely_pathogenic | 0.8874 | pathogenic | -1.577 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
A/Y | 0.6264 | likely_pathogenic | 0.6633 | pathogenic | -1.206 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.