Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16064 | 48415;48416;48417 | chr2:178616601;178616600;178616599 | chr2:179481328;179481327;179481326 |
N2AB | 14423 | 43492;43493;43494 | chr2:178616601;178616600;178616599 | chr2:179481328;179481327;179481326 |
N2A | 13496 | 40711;40712;40713 | chr2:178616601;178616600;178616599 | chr2:179481328;179481327;179481326 |
N2B | 6999 | 21220;21221;21222 | chr2:178616601;178616600;178616599 | chr2:179481328;179481327;179481326 |
Novex-1 | 7124 | 21595;21596;21597 | chr2:178616601;178616600;178616599 | chr2:179481328;179481327;179481326 |
Novex-2 | 7191 | 21796;21797;21798 | chr2:178616601;178616600;178616599 | chr2:179481328;179481327;179481326 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/C | None | None | None | N | 0.435 | 0.156 | 0.225215365344 | gnomAD-4.0.0 | 1.59429E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86357E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.1587 | likely_benign | 0.2104 | benign | -2.186 | Highly Destabilizing | 0.007 | N | 0.365 | neutral | None | None | None | None | N |
F/C | 0.1453 | likely_benign | 0.1812 | benign | -1.903 | Destabilizing | None | N | 0.435 | neutral | N | 0.448060631 | None | None | N |
F/D | 0.7161 | likely_pathogenic | 0.7739 | pathogenic | -1.514 | Destabilizing | 0.136 | N | 0.609 | neutral | None | None | None | None | N |
F/E | 0.7334 | likely_pathogenic | 0.7971 | pathogenic | -1.335 | Destabilizing | 0.136 | N | 0.585 | neutral | None | None | None | None | N |
F/G | 0.4912 | ambiguous | 0.5927 | pathogenic | -2.572 | Highly Destabilizing | 0.061 | N | 0.473 | neutral | None | None | None | None | N |
F/H | 0.4534 | ambiguous | 0.5444 | ambiguous | -1.078 | Destabilizing | 0.214 | N | 0.539 | neutral | None | None | None | None | N |
F/I | 0.0921 | likely_benign | 0.0963 | benign | -0.971 | Destabilizing | 0.005 | N | 0.35 | neutral | N | 0.37351238 | None | None | N |
F/K | 0.6654 | likely_pathogenic | 0.7863 | pathogenic | -1.92 | Destabilizing | 0.072 | N | 0.578 | neutral | None | None | None | None | N |
F/L | 0.572 | likely_pathogenic | 0.6619 | pathogenic | -0.971 | Destabilizing | 0.005 | N | 0.345 | neutral | N | 0.419086551 | None | None | N |
F/M | 0.2503 | likely_benign | 0.3283 | benign | -1.003 | Destabilizing | 0.356 | N | 0.505 | neutral | None | None | None | None | N |
F/N | 0.4745 | ambiguous | 0.5763 | pathogenic | -2.3 | Highly Destabilizing | 0.356 | N | 0.651 | neutral | None | None | None | None | N |
F/P | 0.5475 | ambiguous | 0.6829 | pathogenic | -1.379 | Destabilizing | None | N | 0.458 | neutral | None | None | None | None | N |
F/Q | 0.5933 | likely_pathogenic | 0.7092 | pathogenic | -2.133 | Highly Destabilizing | 0.356 | N | 0.657 | neutral | None | None | None | None | N |
F/R | 0.5794 | likely_pathogenic | 0.6911 | pathogenic | -1.591 | Destabilizing | 0.214 | N | 0.655 | neutral | None | None | None | None | N |
F/S | 0.1969 | likely_benign | 0.2425 | benign | -3.047 | Highly Destabilizing | 0.024 | N | 0.44 | neutral | N | 0.47398514 | None | None | N |
F/T | 0.1348 | likely_benign | 0.176 | benign | -2.75 | Highly Destabilizing | 0.031 | N | 0.412 | neutral | None | None | None | None | N |
F/V | 0.0864 | likely_benign | 0.0941 | benign | -1.379 | Destabilizing | None | N | 0.25 | neutral | N | 0.293700836 | None | None | N |
F/W | 0.3584 | ambiguous | 0.4211 | ambiguous | -0.18 | Destabilizing | 0.356 | N | 0.528 | neutral | None | None | None | None | N |
F/Y | 0.1397 | likely_benign | 0.1665 | benign | -0.537 | Destabilizing | None | N | 0.239 | neutral | N | 0.466446521 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.