Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16069 | 48430;48431;48432 | chr2:178616586;178616585;178616584 | chr2:179481313;179481312;179481311 |
N2AB | 14428 | 43507;43508;43509 | chr2:178616586;178616585;178616584 | chr2:179481313;179481312;179481311 |
N2A | 13501 | 40726;40727;40728 | chr2:178616586;178616585;178616584 | chr2:179481313;179481312;179481311 |
N2B | 7004 | 21235;21236;21237 | chr2:178616586;178616585;178616584 | chr2:179481313;179481312;179481311 |
Novex-1 | 7129 | 21610;21611;21612 | chr2:178616586;178616585;178616584 | chr2:179481313;179481312;179481311 |
Novex-2 | 7196 | 21811;21812;21813 | chr2:178616586;178616585;178616584 | chr2:179481313;179481312;179481311 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs752099554 | -0.442 | 0.012 | N | 0.287 | 0.065 | 0.215109475489 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
K/E | rs752099554 | -0.442 | 0.012 | N | 0.287 | 0.065 | 0.215109475489 | gnomAD-4.0.0 | 1.59419E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86349E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2801 | likely_benign | 0.3121 | benign | -0.217 | Destabilizing | 0.016 | N | 0.399 | neutral | None | None | None | None | N |
K/C | 0.5977 | likely_pathogenic | 0.6957 | pathogenic | -0.257 | Destabilizing | 0.864 | D | 0.443 | neutral | None | None | None | None | N |
K/D | 0.5805 | likely_pathogenic | 0.5983 | pathogenic | -0.073 | Destabilizing | 0.072 | N | 0.405 | neutral | None | None | None | None | N |
K/E | 0.234 | likely_benign | 0.2166 | benign | -0.065 | Destabilizing | 0.012 | N | 0.287 | neutral | N | 0.476740702 | None | None | N |
K/F | 0.8165 | likely_pathogenic | 0.8475 | pathogenic | -0.422 | Destabilizing | 0.356 | N | 0.468 | neutral | None | None | None | None | N |
K/G | 0.3038 | likely_benign | 0.34 | benign | -0.447 | Destabilizing | None | N | 0.161 | neutral | None | None | None | None | N |
K/H | 0.3222 | likely_benign | 0.3581 | ambiguous | -0.876 | Destabilizing | 0.356 | N | 0.425 | neutral | None | None | None | None | N |
K/I | 0.4587 | ambiguous | 0.5034 | ambiguous | 0.319 | Stabilizing | 0.356 | N | 0.483 | neutral | None | None | None | None | N |
K/L | 0.4323 | ambiguous | 0.462 | ambiguous | 0.319 | Stabilizing | 0.072 | N | 0.423 | neutral | None | None | None | None | N |
K/M | 0.3214 | likely_benign | 0.3378 | benign | 0.371 | Stabilizing | 0.295 | N | 0.433 | neutral | N | 0.506989808 | None | None | N |
K/N | 0.4827 | ambiguous | 0.4742 | ambiguous | 0.108 | Stabilizing | 0.055 | N | 0.194 | neutral | N | 0.473645445 | None | None | N |
K/P | 0.4578 | ambiguous | 0.5039 | ambiguous | 0.169 | Stabilizing | 0.136 | N | 0.444 | neutral | None | None | None | None | N |
K/Q | 0.151 | likely_benign | 0.1543 | benign | -0.172 | Destabilizing | 0.001 | N | 0.115 | neutral | N | 0.480326657 | None | None | N |
K/R | 0.0628 | likely_benign | 0.0626 | benign | -0.135 | Destabilizing | None | N | 0.062 | neutral | N | 0.449508273 | None | None | N |
K/S | 0.3738 | ambiguous | 0.3944 | ambiguous | -0.456 | Destabilizing | 0.016 | N | 0.228 | neutral | None | None | None | None | N |
K/T | 0.227 | likely_benign | 0.2405 | benign | -0.292 | Destabilizing | 0.055 | N | 0.373 | neutral | N | 0.467693225 | None | None | N |
K/V | 0.3867 | ambiguous | 0.4204 | ambiguous | 0.169 | Stabilizing | 0.072 | N | 0.463 | neutral | None | None | None | None | N |
K/W | 0.6622 | likely_pathogenic | 0.7322 | pathogenic | -0.337 | Destabilizing | 0.864 | D | 0.467 | neutral | None | None | None | None | N |
K/Y | 0.6627 | likely_pathogenic | 0.6855 | pathogenic | 0.012 | Stabilizing | 0.356 | N | 0.439 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.