Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16074 | 48445;48446;48447 | chr2:178616571;178616570;178616569 | chr2:179481298;179481297;179481296 |
N2AB | 14433 | 43522;43523;43524 | chr2:178616571;178616570;178616569 | chr2:179481298;179481297;179481296 |
N2A | 13506 | 40741;40742;40743 | chr2:178616571;178616570;178616569 | chr2:179481298;179481297;179481296 |
N2B | 7009 | 21250;21251;21252 | chr2:178616571;178616570;178616569 | chr2:179481298;179481297;179481296 |
Novex-1 | 7134 | 21625;21626;21627 | chr2:178616571;178616570;178616569 | chr2:179481298;179481297;179481296 |
Novex-2 | 7201 | 21826;21827;21828 | chr2:178616571;178616570;178616569 | chr2:179481298;179481297;179481296 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1285719180 | -1.656 | 1.0 | D | 0.719 | 0.487 | 0.607129708303 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
L/F | rs1285719180 | -1.656 | 1.0 | D | 0.719 | 0.487 | 0.607129708303 | gnomAD-4.0.0 | 6.84733E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73853E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9478 | likely_pathogenic | 0.9529 | pathogenic | -2.706 | Highly Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
L/C | 0.8507 | likely_pathogenic | 0.8817 | pathogenic | -1.726 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
L/D | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -3.292 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
L/E | 0.9973 | likely_pathogenic | 0.9966 | pathogenic | -2.967 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
L/F | 0.448 | ambiguous | 0.4666 | ambiguous | -1.63 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | D | 0.713124516 | None | None | N |
L/G | 0.9922 | likely_pathogenic | 0.9916 | pathogenic | -3.287 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
L/H | 0.9915 | likely_pathogenic | 0.9899 | pathogenic | -3.093 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/I | 0.1072 | likely_benign | 0.1248 | benign | -0.93 | Destabilizing | 0.999 | D | 0.549 | neutral | None | None | None | None | N |
L/K | 0.9947 | likely_pathogenic | 0.9931 | pathogenic | -2.023 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
L/M | 0.2116 | likely_benign | 0.2331 | benign | -1.179 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | D | 0.676533383 | None | None | N |
L/N | 0.9976 | likely_pathogenic | 0.9972 | pathogenic | -2.811 | Highly Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
L/P | 0.9975 | likely_pathogenic | 0.9966 | pathogenic | -1.519 | Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
L/Q | 0.9876 | likely_pathogenic | 0.984 | pathogenic | -2.379 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/R | 0.9894 | likely_pathogenic | 0.987 | pathogenic | -2.279 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/S | 0.9942 | likely_pathogenic | 0.9938 | pathogenic | -3.227 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | D | 0.798073427 | None | None | N |
L/T | 0.97 | likely_pathogenic | 0.9727 | pathogenic | -2.739 | Highly Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
L/V | 0.1574 | likely_benign | 0.1887 | benign | -1.519 | Destabilizing | 0.999 | D | 0.564 | neutral | N | 0.488419852 | None | None | N |
L/W | 0.9571 | likely_pathogenic | 0.952 | pathogenic | -1.906 | Destabilizing | 1.0 | D | 0.849 | deleterious | D | 0.798073427 | None | None | N |
L/Y | 0.9624 | likely_pathogenic | 0.9658 | pathogenic | -1.823 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.