Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16075 | 48448;48449;48450 | chr2:178616568;178616567;178616566 | chr2:179481295;179481294;179481293 |
N2AB | 14434 | 43525;43526;43527 | chr2:178616568;178616567;178616566 | chr2:179481295;179481294;179481293 |
N2A | 13507 | 40744;40745;40746 | chr2:178616568;178616567;178616566 | chr2:179481295;179481294;179481293 |
N2B | 7010 | 21253;21254;21255 | chr2:178616568;178616567;178616566 | chr2:179481295;179481294;179481293 |
Novex-1 | 7135 | 21628;21629;21630 | chr2:178616568;178616567;178616566 | chr2:179481295;179481294;179481293 |
Novex-2 | 7202 | 21829;21830;21831 | chr2:178616568;178616567;178616566 | chr2:179481295;179481294;179481293 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs773602170 | -1.521 | 0.022 | N | 0.189 | 0.068 | 0.149567049428 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
T/S | rs773602170 | -1.521 | 0.022 | N | 0.189 | 0.068 | 0.149567049428 | gnomAD-4.0.0 | 1.59408E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4339E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0828 | likely_benign | 0.0965 | benign | -0.859 | Destabilizing | 0.005 | N | 0.181 | neutral | N | 0.47168355 | None | None | N |
T/C | 0.2388 | likely_benign | 0.3153 | benign | -0.538 | Destabilizing | 0.998 | D | 0.534 | neutral | None | None | None | None | N |
T/D | 0.3936 | ambiguous | 0.4852 | ambiguous | -1.423 | Destabilizing | 0.842 | D | 0.455 | neutral | None | None | None | None | N |
T/E | 0.2757 | likely_benign | 0.354 | ambiguous | -1.229 | Destabilizing | 0.842 | D | 0.418 | neutral | None | None | None | None | N |
T/F | 0.1474 | likely_benign | 0.1809 | benign | -0.402 | Destabilizing | 0.949 | D | 0.585 | neutral | None | None | None | None | N |
T/G | 0.2098 | likely_benign | 0.2649 | benign | -1.282 | Destabilizing | 0.525 | D | 0.484 | neutral | None | None | None | None | N |
T/H | 0.1729 | likely_benign | 0.2137 | benign | -1.508 | Destabilizing | 0.998 | D | 0.595 | neutral | None | None | None | None | N |
T/I | 0.1152 | likely_benign | 0.1372 | benign | 0.248 | Stabilizing | 0.669 | D | 0.438 | neutral | N | 0.4806623 | None | None | N |
T/K | 0.1723 | likely_benign | 0.2113 | benign | -0.619 | Destabilizing | 0.842 | D | 0.424 | neutral | None | None | None | None | N |
T/L | 0.0777 | likely_benign | 0.088 | benign | 0.248 | Stabilizing | 0.525 | D | 0.46 | neutral | None | None | None | None | N |
T/M | 0.0802 | likely_benign | 0.0902 | benign | 0.209 | Stabilizing | 0.172 | N | 0.329 | neutral | None | None | None | None | N |
T/N | 0.1247 | likely_benign | 0.1417 | benign | -1.264 | Destabilizing | 0.801 | D | 0.43 | neutral | N | 0.473012497 | None | None | N |
T/P | 0.6908 | likely_pathogenic | 0.7167 | pathogenic | -0.089 | Destabilizing | 0.966 | D | 0.523 | neutral | D | 0.637434465 | None | None | N |
T/Q | 0.1806 | likely_benign | 0.2175 | benign | -0.976 | Destabilizing | 0.974 | D | 0.545 | neutral | None | None | None | None | N |
T/R | 0.1407 | likely_benign | 0.169 | benign | -0.883 | Destabilizing | 0.949 | D | 0.526 | neutral | None | None | None | None | N |
T/S | 0.0863 | likely_benign | 0.0985 | benign | -1.41 | Destabilizing | 0.022 | N | 0.189 | neutral | N | 0.394702946 | None | None | N |
T/V | 0.1046 | likely_benign | 0.1253 | benign | -0.089 | Destabilizing | 0.525 | D | 0.419 | neutral | None | None | None | None | N |
T/W | 0.4125 | ambiguous | 0.5072 | ambiguous | -0.694 | Destabilizing | 0.998 | D | 0.623 | neutral | None | None | None | None | N |
T/Y | 0.1855 | likely_benign | 0.2309 | benign | -0.292 | Destabilizing | 0.991 | D | 0.59 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.