Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1609 | 5050;5051;5052 | chr2:178777039;178777038;178777037 | chr2:179641766;179641765;179641764 |
N2AB | 1609 | 5050;5051;5052 | chr2:178777039;178777038;178777037 | chr2:179641766;179641765;179641764 |
N2A | 1609 | 5050;5051;5052 | chr2:178777039;178777038;178777037 | chr2:179641766;179641765;179641764 |
N2B | 1563 | 4912;4913;4914 | chr2:178777039;178777038;178777037 | chr2:179641766;179641765;179641764 |
Novex-1 | 1563 | 4912;4913;4914 | chr2:178777039;178777038;178777037 | chr2:179641766;179641765;179641764 |
Novex-2 | 1563 | 4912;4913;4914 | chr2:178777039;178777038;178777037 | chr2:179641766;179641765;179641764 |
Novex-3 | 1609 | 5050;5051;5052 | chr2:178777039;178777038;178777037 | chr2:179641766;179641765;179641764 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 0.949 | N | 0.417 | 0.126 | 0.195762928549 | gnomAD-4.0.0 | 6.84137E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99321E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.076 | likely_benign | 0.0699 | benign | -0.189 | Destabilizing | 0.003 | N | 0.122 | neutral | N | 0.450085704 | None | None | N |
T/C | 0.3901 | ambiguous | 0.368 | ambiguous | -0.301 | Destabilizing | 0.989 | D | 0.474 | neutral | None | None | None | None | N |
T/D | 0.2891 | likely_benign | 0.2485 | benign | 0.141 | Stabilizing | 0.961 | D | 0.405 | neutral | None | None | None | None | N |
T/E | 0.2249 | likely_benign | 0.1917 | benign | 0.047 | Stabilizing | 0.923 | D | 0.403 | neutral | None | None | None | None | N |
T/F | 0.1835 | likely_benign | 0.1697 | benign | -0.843 | Destabilizing | 0.923 | D | 0.525 | neutral | None | None | None | None | N |
T/G | 0.1504 | likely_benign | 0.1371 | benign | -0.25 | Destabilizing | 0.633 | D | 0.45 | neutral | None | None | None | None | N |
T/H | 0.2343 | likely_benign | 0.2099 | benign | -0.468 | Destabilizing | 0.996 | D | 0.569 | neutral | None | None | None | None | N |
T/I | 0.0991 | likely_benign | 0.0963 | benign | -0.153 | Destabilizing | 0.018 | N | 0.25 | neutral | N | 0.451530256 | None | None | N |
T/K | 0.1643 | likely_benign | 0.1396 | benign | -0.229 | Destabilizing | 0.923 | D | 0.4 | neutral | None | None | None | None | N |
T/L | 0.0825 | likely_benign | 0.0792 | benign | -0.153 | Destabilizing | 0.197 | N | 0.407 | neutral | None | None | None | None | N |
T/M | 0.0824 | likely_benign | 0.0792 | benign | -0.097 | Destabilizing | 0.979 | D | 0.463 | neutral | None | None | None | None | N |
T/N | 0.0904 | likely_benign | 0.0851 | benign | -0.026 | Destabilizing | 0.949 | D | 0.417 | neutral | N | 0.446549199 | None | None | N |
T/P | 0.1907 | likely_benign | 0.154 | benign | -0.14 | Destabilizing | 0.949 | D | 0.451 | neutral | N | 0.453534179 | None | None | N |
T/Q | 0.1776 | likely_benign | 0.1567 | benign | -0.242 | Destabilizing | 0.961 | D | 0.437 | neutral | None | None | None | None | N |
T/R | 0.143 | likely_benign | 0.1214 | benign | 0.026 | Stabilizing | 0.923 | D | 0.446 | neutral | None | None | None | None | N |
T/S | 0.0906 | likely_benign | 0.086 | benign | -0.206 | Destabilizing | 0.565 | D | 0.399 | neutral | N | 0.447215533 | None | None | N |
T/V | 0.0888 | likely_benign | 0.0851 | benign | -0.14 | Destabilizing | 0.197 | N | 0.401 | neutral | None | None | None | None | N |
T/W | 0.5587 | ambiguous | 0.511 | ambiguous | -0.911 | Destabilizing | 0.996 | D | 0.609 | neutral | None | None | None | None | N |
T/Y | 0.295 | likely_benign | 0.2673 | benign | -0.591 | Destabilizing | 0.961 | D | 0.546 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.