Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16093 | 48502;48503;48504 | chr2:178616514;178616513;178616512 | chr2:179481241;179481240;179481239 |
N2AB | 14452 | 43579;43580;43581 | chr2:178616514;178616513;178616512 | chr2:179481241;179481240;179481239 |
N2A | 13525 | 40798;40799;40800 | chr2:178616514;178616513;178616512 | chr2:179481241;179481240;179481239 |
N2B | 7028 | 21307;21308;21309 | chr2:178616514;178616513;178616512 | chr2:179481241;179481240;179481239 |
Novex-1 | 7153 | 21682;21683;21684 | chr2:178616514;178616513;178616512 | chr2:179481241;179481240;179481239 |
Novex-2 | 7220 | 21883;21884;21885 | chr2:178616514;178616513;178616512 | chr2:179481241;179481240;179481239 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs1320775896 | -1.362 | 0.01 | N | 0.357 | 0.145 | 0.134241683229 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
E/Q | rs1320775896 | -1.362 | 0.01 | N | 0.357 | 0.145 | 0.134241683229 | gnomAD-4.0.0 | 1.59429E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86457E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6597 | likely_pathogenic | 0.7219 | pathogenic | -1.53 | Destabilizing | 0.41 | N | 0.665 | neutral | D | 0.657097924 | None | None | N |
E/C | 0.9578 | likely_pathogenic | 0.9712 | pathogenic | -0.88 | Destabilizing | 0.993 | D | 0.791 | deleterious | None | None | None | None | N |
E/D | 0.4933 | ambiguous | 0.604 | pathogenic | -1.692 | Destabilizing | 0.581 | D | 0.631 | neutral | N | 0.507805677 | None | None | N |
E/F | 0.9271 | likely_pathogenic | 0.9538 | pathogenic | -1.099 | Destabilizing | 0.993 | D | 0.823 | deleterious | None | None | None | None | N |
E/G | 0.6976 | likely_pathogenic | 0.7634 | pathogenic | -1.95 | Destabilizing | 0.83 | D | 0.754 | deleterious | D | 0.682270609 | None | None | N |
E/H | 0.8823 | likely_pathogenic | 0.9163 | pathogenic | -1.154 | Destabilizing | 0.961 | D | 0.838 | deleterious | None | None | None | None | N |
E/I | 0.8453 | likely_pathogenic | 0.8882 | pathogenic | -0.324 | Destabilizing | 0.929 | D | 0.825 | deleterious | None | None | None | None | N |
E/K | 0.7317 | likely_pathogenic | 0.7788 | pathogenic | -1.664 | Destabilizing | 0.41 | N | 0.651 | neutral | D | 0.638051635 | None | None | N |
E/L | 0.7902 | likely_pathogenic | 0.8647 | pathogenic | -0.324 | Destabilizing | 0.866 | D | 0.794 | deleterious | None | None | None | None | N |
E/M | 0.7789 | likely_pathogenic | 0.8389 | pathogenic | 0.434 | Stabilizing | 0.98 | D | 0.818 | deleterious | None | None | None | None | N |
E/N | 0.809 | likely_pathogenic | 0.8851 | pathogenic | -1.923 | Destabilizing | 0.866 | D | 0.817 | deleterious | None | None | None | None | N |
E/P | 0.999 | likely_pathogenic | 0.9991 | pathogenic | -0.711 | Destabilizing | 0.929 | D | 0.804 | deleterious | None | None | None | None | N |
E/Q | 0.3678 | ambiguous | 0.398 | ambiguous | -1.612 | Destabilizing | 0.01 | N | 0.357 | neutral | N | 0.480700739 | None | None | N |
E/R | 0.8383 | likely_pathogenic | 0.8717 | pathogenic | -1.464 | Destabilizing | 0.764 | D | 0.818 | deleterious | None | None | None | None | N |
E/S | 0.6367 | likely_pathogenic | 0.7284 | pathogenic | -2.585 | Highly Destabilizing | 0.48 | N | 0.7 | prob.neutral | None | None | None | None | N |
E/T | 0.761 | likely_pathogenic | 0.8281 | pathogenic | -2.196 | Highly Destabilizing | 0.866 | D | 0.778 | deleterious | None | None | None | None | N |
E/V | 0.714 | likely_pathogenic | 0.7753 | pathogenic | -0.711 | Destabilizing | 0.83 | D | 0.779 | deleterious | D | 0.635618085 | None | None | N |
E/W | 0.9673 | likely_pathogenic | 0.9789 | pathogenic | -1.144 | Destabilizing | 0.993 | D | 0.799 | deleterious | None | None | None | None | N |
E/Y | 0.8877 | likely_pathogenic | 0.9315 | pathogenic | -0.925 | Destabilizing | 0.929 | D | 0.819 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.