Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16103 | 48532;48533;48534 | chr2:178616484;178616483;178616482 | chr2:179481211;179481210;179481209 |
N2AB | 14462 | 43609;43610;43611 | chr2:178616484;178616483;178616482 | chr2:179481211;179481210;179481209 |
N2A | 13535 | 40828;40829;40830 | chr2:178616484;178616483;178616482 | chr2:179481211;179481210;179481209 |
N2B | 7038 | 21337;21338;21339 | chr2:178616484;178616483;178616482 | chr2:179481211;179481210;179481209 |
Novex-1 | 7163 | 21712;21713;21714 | chr2:178616484;178616483;178616482 | chr2:179481211;179481210;179481209 |
Novex-2 | 7230 | 21913;21914;21915 | chr2:178616484;178616483;178616482 | chr2:179481211;179481210;179481209 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.001 | N | 0.167 | 0.103 | 0.258283824007 | gnomAD-4.0.0 | 6.84876E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.0021E-07 | 0 | 0 |
T/S | rs1411572700 | None | 0.003 | N | 0.158 | 0.088 | 0.115124310173 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/S | rs1411572700 | None | 0.003 | N | 0.158 | 0.088 | 0.115124310173 | gnomAD-4.0.0 | 6.58553E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47271E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0835 | likely_benign | 0.0878 | benign | -0.703 | Destabilizing | None | N | 0.095 | neutral | N | 0.460309703 | None | None | N |
T/C | 0.3779 | ambiguous | 0.4338 | ambiguous | -0.463 | Destabilizing | 0.94 | D | 0.307 | neutral | None | None | None | None | N |
T/D | 0.4568 | ambiguous | 0.4914 | ambiguous | 0.295 | Stabilizing | 0.418 | N | 0.294 | neutral | None | None | None | None | N |
T/E | 0.3202 | likely_benign | 0.3414 | ambiguous | 0.293 | Stabilizing | 0.418 | N | 0.3 | neutral | None | None | None | None | N |
T/F | 0.2943 | likely_benign | 0.2972 | benign | -0.814 | Destabilizing | 0.418 | N | 0.358 | neutral | None | None | None | None | N |
T/G | 0.2229 | likely_benign | 0.2473 | benign | -0.941 | Destabilizing | 0.129 | N | 0.281 | neutral | None | None | None | None | N |
T/H | 0.271 | likely_benign | 0.2966 | benign | -1.089 | Destabilizing | 0.836 | D | 0.331 | neutral | None | None | None | None | N |
T/I | 0.1732 | likely_benign | 0.1625 | benign | -0.167 | Destabilizing | 0.001 | N | 0.167 | neutral | N | 0.45626025 | None | None | N |
T/K | 0.2598 | likely_benign | 0.2665 | benign | -0.522 | Destabilizing | 0.264 | N | 0.305 | neutral | None | None | None | None | N |
T/L | 0.0992 | likely_benign | 0.1046 | benign | -0.167 | Destabilizing | 0.022 | N | 0.223 | neutral | None | None | None | None | N |
T/M | 0.0874 | likely_benign | 0.0912 | benign | -0.094 | Destabilizing | 0.027 | N | 0.209 | neutral | None | None | None | None | N |
T/N | 0.1124 | likely_benign | 0.1185 | benign | -0.459 | Destabilizing | 0.213 | N | 0.204 | neutral | N | 0.477984237 | None | None | N |
T/P | 0.5101 | ambiguous | 0.4965 | ambiguous | -0.314 | Destabilizing | 0.523 | D | 0.34 | neutral | D | 0.532858515 | None | None | N |
T/Q | 0.2021 | likely_benign | 0.2153 | benign | -0.57 | Destabilizing | 0.418 | N | 0.386 | neutral | None | None | None | None | N |
T/R | 0.2198 | likely_benign | 0.2298 | benign | -0.307 | Destabilizing | 0.418 | N | 0.336 | neutral | None | None | None | None | N |
T/S | 0.1011 | likely_benign | 0.1113 | benign | -0.786 | Destabilizing | 0.003 | N | 0.158 | neutral | N | 0.452830656 | None | None | N |
T/V | 0.1273 | likely_benign | 0.1294 | benign | -0.314 | Destabilizing | 0.001 | N | 0.091 | neutral | None | None | None | None | N |
T/W | 0.6322 | likely_pathogenic | 0.6571 | pathogenic | -0.762 | Destabilizing | 0.983 | D | 0.337 | neutral | None | None | None | None | N |
T/Y | 0.3288 | likely_benign | 0.3535 | ambiguous | -0.515 | Destabilizing | 0.836 | D | 0.397 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.