Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16109 | 48550;48551;48552 | chr2:178615776;178615775;178615774 | chr2:179480503;179480502;179480501 |
N2AB | 14468 | 43627;43628;43629 | chr2:178615776;178615775;178615774 | chr2:179480503;179480502;179480501 |
N2A | 13541 | 40846;40847;40848 | chr2:178615776;178615775;178615774 | chr2:179480503;179480502;179480501 |
N2B | 7044 | 21355;21356;21357 | chr2:178615776;178615775;178615774 | chr2:179480503;179480502;179480501 |
Novex-1 | 7169 | 21730;21731;21732 | chr2:178615776;178615775;178615774 | chr2:179480503;179480502;179480501 |
Novex-2 | 7236 | 21931;21932;21933 | chr2:178615776;178615775;178615774 | chr2:179480503;179480502;179480501 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 0.317 | D | 0.599 | 0.223 | 0.430923071578 | gnomAD-4.0.0 | 1.59682E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86761E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2965 | likely_benign | 0.3565 | ambiguous | -1.353 | Destabilizing | 0.027 | N | 0.526 | neutral | N | 0.509133154 | None | None | N |
V/C | 0.676 | likely_pathogenic | 0.735 | pathogenic | -0.706 | Destabilizing | 0.935 | D | 0.521 | neutral | None | None | None | None | N |
V/D | 0.7638 | likely_pathogenic | 0.8092 | pathogenic | -1.638 | Destabilizing | 0.38 | N | 0.622 | neutral | None | None | None | None | N |
V/E | 0.6587 | likely_pathogenic | 0.6828 | pathogenic | -1.356 | Destabilizing | 0.484 | N | 0.6 | neutral | D | 0.538287649 | None | None | N |
V/F | 0.3624 | ambiguous | 0.4148 | ambiguous | -0.668 | Destabilizing | 0.38 | N | 0.601 | neutral | None | None | None | None | N |
V/G | 0.4532 | ambiguous | 0.5127 | ambiguous | -1.938 | Destabilizing | None | N | 0.483 | neutral | N | 0.489627273 | None | None | N |
V/H | 0.7948 | likely_pathogenic | 0.8523 | pathogenic | -1.907 | Destabilizing | 0.935 | D | 0.582 | neutral | None | None | None | None | N |
V/I | 0.0887 | likely_benign | 0.0977 | benign | 0.299 | Stabilizing | None | N | 0.152 | neutral | None | None | None | None | N |
V/K | 0.6773 | likely_pathogenic | 0.7344 | pathogenic | -0.718 | Destabilizing | 0.38 | N | 0.605 | neutral | None | None | None | None | N |
V/L | 0.225 | likely_benign | 0.2735 | benign | 0.299 | Stabilizing | None | N | 0.205 | neutral | N | 0.477660745 | None | None | N |
V/M | 0.2342 | likely_benign | 0.291 | benign | 0.11 | Stabilizing | 0.317 | N | 0.599 | neutral | D | 0.581187225 | None | None | N |
V/N | 0.5675 | likely_pathogenic | 0.6513 | pathogenic | -1.168 | Destabilizing | 0.38 | N | 0.627 | neutral | None | None | None | None | N |
V/P | 0.7497 | likely_pathogenic | 0.8148 | pathogenic | -0.226 | Destabilizing | 0.555 | D | 0.607 | neutral | None | None | None | None | N |
V/Q | 0.5889 | likely_pathogenic | 0.6596 | pathogenic | -0.844 | Destabilizing | 0.555 | D | 0.569 | neutral | None | None | None | None | N |
V/R | 0.6268 | likely_pathogenic | 0.6917 | pathogenic | -1.016 | Destabilizing | 0.555 | D | 0.629 | neutral | None | None | None | None | N |
V/S | 0.4066 | ambiguous | 0.4903 | ambiguous | -1.806 | Destabilizing | 0.081 | N | 0.605 | neutral | None | None | None | None | N |
V/T | 0.3375 | likely_benign | 0.4049 | ambiguous | -1.355 | Destabilizing | 0.149 | N | 0.585 | neutral | None | None | None | None | N |
V/W | 0.9409 | likely_pathogenic | 0.9576 | pathogenic | -1.201 | Destabilizing | 0.935 | D | 0.621 | neutral | None | None | None | None | N |
V/Y | 0.8034 | likely_pathogenic | 0.8485 | pathogenic | -0.709 | Destabilizing | 0.791 | D | 0.601 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.