Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16110 | 48553;48554;48555 | chr2:178615773;178615772;178615771 | chr2:179480500;179480499;179480498 |
N2AB | 14469 | 43630;43631;43632 | chr2:178615773;178615772;178615771 | chr2:179480500;179480499;179480498 |
N2A | 13542 | 40849;40850;40851 | chr2:178615773;178615772;178615771 | chr2:179480500;179480499;179480498 |
N2B | 7045 | 21358;21359;21360 | chr2:178615773;178615772;178615771 | chr2:179480500;179480499;179480498 |
Novex-1 | 7170 | 21733;21734;21735 | chr2:178615773;178615772;178615771 | chr2:179480500;179480499;179480498 |
Novex-2 | 7237 | 21934;21935;21936 | chr2:178615773;178615772;178615771 | chr2:179480500;179480499;179480498 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.002 | N | 0.086 | 0.109 | 0.101711395817 | gnomAD-4.0.0 | 1.59685E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86773E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0719 | likely_benign | 0.0861 | benign | -0.541 | Destabilizing | 0.012 | N | 0.119 | neutral | N | 0.470506047 | None | None | N |
T/C | 0.3164 | likely_benign | 0.4094 | ambiguous | -0.453 | Destabilizing | 0.901 | D | 0.245 | neutral | None | None | None | None | N |
T/D | 0.248 | likely_benign | 0.2968 | benign | 0.578 | Stabilizing | 0.296 | N | 0.27 | neutral | None | None | None | None | N |
T/E | 0.1896 | likely_benign | 0.2146 | benign | 0.549 | Stabilizing | 0.08 | N | 0.249 | neutral | None | None | None | None | N |
T/F | 0.2515 | likely_benign | 0.2943 | benign | -0.942 | Destabilizing | 0.296 | N | 0.397 | neutral | None | None | None | None | N |
T/G | 0.1607 | likely_benign | 0.2063 | benign | -0.702 | Destabilizing | 0.08 | N | 0.25 | neutral | None | None | None | None | N |
T/H | 0.1948 | likely_benign | 0.2364 | benign | -0.733 | Destabilizing | 0.749 | D | 0.297 | neutral | None | None | None | None | N |
T/I | 0.1666 | likely_benign | 0.1961 | benign | -0.224 | Destabilizing | None | N | 0.108 | neutral | N | 0.479612614 | None | None | N |
T/K | 0.1378 | likely_benign | 0.1514 | benign | -0.21 | Destabilizing | 0.08 | N | 0.283 | neutral | None | None | None | None | N |
T/L | 0.0876 | likely_benign | 0.101 | benign | -0.224 | Destabilizing | None | N | 0.082 | neutral | None | None | None | None | N |
T/M | 0.0904 | likely_benign | 0.1 | benign | -0.31 | Destabilizing | 0.016 | N | 0.141 | neutral | None | None | None | None | N |
T/N | 0.0913 | likely_benign | 0.1052 | benign | -0.189 | Destabilizing | 0.137 | N | 0.173 | neutral | N | 0.455436093 | None | None | N |
T/P | 0.0728 | likely_benign | 0.085 | benign | -0.3 | Destabilizing | 0.001 | N | 0.128 | neutral | N | 0.464698064 | None | None | N |
T/Q | 0.1627 | likely_benign | 0.1862 | benign | -0.289 | Destabilizing | 0.007 | N | 0.094 | neutral | None | None | None | None | N |
T/R | 0.1336 | likely_benign | 0.1435 | benign | 0.038 | Stabilizing | 0.296 | N | 0.295 | neutral | None | None | None | None | N |
T/S | 0.0857 | likely_benign | 0.1042 | benign | -0.498 | Destabilizing | 0.002 | N | 0.086 | neutral | N | 0.468632191 | None | None | N |
T/V | 0.1239 | likely_benign | 0.1433 | benign | -0.3 | Destabilizing | None | N | 0.047 | neutral | None | None | None | None | N |
T/W | 0.508 | ambiguous | 0.5457 | ambiguous | -0.943 | Destabilizing | 0.972 | D | 0.284 | neutral | None | None | None | None | N |
T/Y | 0.2437 | likely_benign | 0.2867 | benign | -0.644 | Destabilizing | 0.46 | N | 0.381 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.