Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16120 | 48583;48584;48585 | chr2:178615743;178615742;178615741 | chr2:179480470;179480469;179480468 |
N2AB | 14479 | 43660;43661;43662 | chr2:178615743;178615742;178615741 | chr2:179480470;179480469;179480468 |
N2A | 13552 | 40879;40880;40881 | chr2:178615743;178615742;178615741 | chr2:179480470;179480469;179480468 |
N2B | 7055 | 21388;21389;21390 | chr2:178615743;178615742;178615741 | chr2:179480470;179480469;179480468 |
Novex-1 | 7180 | 21763;21764;21765 | chr2:178615743;178615742;178615741 | chr2:179480470;179480469;179480468 |
Novex-2 | 7247 | 21964;21965;21966 | chr2:178615743;178615742;178615741 | chr2:179480470;179480469;179480468 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs745999025 | -1.528 | None | N | 0.091 | 0.135 | 0.330069100803 | gnomAD-2.1.1 | 7.16E-06 | None | None | None | None | N | None | 8.28E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/A | rs745999025 | -1.528 | None | N | 0.091 | 0.135 | 0.330069100803 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 9.66E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/A | rs745999025 | -1.528 | None | N | 0.091 | 0.135 | 0.330069100803 | gnomAD-4.0.0 | 5.07592E-06 | None | None | None | None | N | None | 6.99423E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.20507E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2043 | likely_benign | 0.2482 | benign | -1.181 | Destabilizing | None | N | 0.091 | neutral | N | 0.479377875 | None | None | N |
V/C | 0.61 | likely_pathogenic | 0.6975 | pathogenic | -0.812 | Destabilizing | 0.824 | D | 0.357 | neutral | None | None | None | None | N |
V/D | 0.4733 | ambiguous | 0.5322 | ambiguous | -0.901 | Destabilizing | 0.484 | N | 0.419 | neutral | N | 0.480707155 | None | None | N |
V/E | 0.3288 | likely_benign | 0.3882 | ambiguous | -0.914 | Destabilizing | 0.38 | N | 0.392 | neutral | None | None | None | None | N |
V/F | 0.1602 | likely_benign | 0.1938 | benign | -0.928 | Destabilizing | 0.188 | N | 0.372 | neutral | N | 0.480559353 | None | None | N |
V/G | 0.234 | likely_benign | 0.2716 | benign | -1.464 | Destabilizing | 0.062 | N | 0.371 | neutral | D | 0.61158625 | None | None | N |
V/H | 0.4758 | ambiguous | 0.5764 | pathogenic | -0.862 | Destabilizing | 0.935 | D | 0.402 | neutral | None | None | None | None | N |
V/I | 0.0678 | likely_benign | 0.0743 | benign | -0.521 | Destabilizing | None | N | 0.082 | neutral | N | 0.413362327 | None | None | N |
V/K | 0.3634 | ambiguous | 0.4512 | ambiguous | -0.963 | Destabilizing | 0.38 | N | 0.386 | neutral | None | None | None | None | N |
V/L | 0.1017 | likely_benign | 0.1445 | benign | -0.521 | Destabilizing | None | N | 0.068 | neutral | N | 0.466984545 | None | None | N |
V/M | 0.1206 | likely_benign | 0.1525 | benign | -0.488 | Destabilizing | 0.016 | N | 0.223 | neutral | None | None | None | None | N |
V/N | 0.265 | likely_benign | 0.3311 | benign | -0.778 | Destabilizing | 0.555 | D | 0.423 | neutral | None | None | None | None | N |
V/P | 0.4723 | ambiguous | 0.5316 | ambiguous | -0.705 | Destabilizing | 0.555 | D | 0.407 | neutral | None | None | None | None | N |
V/Q | 0.2395 | likely_benign | 0.3158 | benign | -0.942 | Destabilizing | 0.555 | D | 0.407 | neutral | None | None | None | None | N |
V/R | 0.3342 | likely_benign | 0.4137 | ambiguous | -0.424 | Destabilizing | 0.555 | D | 0.427 | neutral | None | None | None | None | N |
V/S | 0.216 | likely_benign | 0.2581 | benign | -1.263 | Destabilizing | 0.081 | N | 0.39 | neutral | None | None | None | None | N |
V/T | 0.1957 | likely_benign | 0.2379 | benign | -1.161 | Destabilizing | 0.149 | N | 0.223 | neutral | None | None | None | None | N |
V/W | 0.7258 | likely_pathogenic | 0.8083 | pathogenic | -1.077 | Destabilizing | 0.935 | D | 0.444 | neutral | None | None | None | None | N |
V/Y | 0.4856 | ambiguous | 0.5677 | pathogenic | -0.781 | Destabilizing | 0.555 | D | 0.373 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.