Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16128 | 48607;48608;48609 | chr2:178615719;178615718;178615717 | chr2:179480446;179480445;179480444 |
N2AB | 14487 | 43684;43685;43686 | chr2:178615719;178615718;178615717 | chr2:179480446;179480445;179480444 |
N2A | 13560 | 40903;40904;40905 | chr2:178615719;178615718;178615717 | chr2:179480446;179480445;179480444 |
N2B | 7063 | 21412;21413;21414 | chr2:178615719;178615718;178615717 | chr2:179480446;179480445;179480444 |
Novex-1 | 7188 | 21787;21788;21789 | chr2:178615719;178615718;178615717 | chr2:179480446;179480445;179480444 |
Novex-2 | 7255 | 21988;21989;21990 | chr2:178615719;178615718;178615717 | chr2:179480446;179480445;179480444 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.896 | N | 0.668 | 0.275 | 0.264547087235 | gnomAD-4.0.0 | 1.59428E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43402E-05 | 0 |
K/T | None | None | 0.946 | N | 0.606 | 0.275 | 0.288727942641 | gnomAD-4.0.0 | 3.18852E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72889E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.69 | likely_pathogenic | 0.726 | pathogenic | -1.299 | Destabilizing | 0.919 | D | 0.635 | neutral | None | None | None | None | N |
K/C | 0.7141 | likely_pathogenic | 0.7413 | pathogenic | -1.423 | Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
K/D | 0.9763 | likely_pathogenic | 0.9811 | pathogenic | -2.086 | Highly Destabilizing | 0.988 | D | 0.624 | neutral | None | None | None | None | N |
K/E | 0.684 | likely_pathogenic | 0.7284 | pathogenic | -1.789 | Destabilizing | 0.896 | D | 0.668 | neutral | N | 0.479874733 | None | None | N |
K/F | 0.9561 | likely_pathogenic | 0.9654 | pathogenic | -0.424 | Destabilizing | 0.996 | D | 0.812 | deleterious | None | None | None | None | N |
K/G | 0.8176 | likely_pathogenic | 0.8498 | pathogenic | -1.779 | Destabilizing | 0.959 | D | 0.631 | neutral | None | None | None | None | N |
K/H | 0.4865 | ambiguous | 0.5099 | ambiguous | -1.805 | Destabilizing | 0.988 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/I | 0.7477 | likely_pathogenic | 0.8065 | pathogenic | 0.065 | Stabilizing | 0.984 | D | 0.807 | deleterious | N | 0.484722186 | None | None | N |
K/L | 0.6535 | likely_pathogenic | 0.7183 | pathogenic | 0.065 | Stabilizing | 0.919 | D | 0.631 | neutral | None | None | None | None | N |
K/M | 0.4767 | ambiguous | 0.5462 | ambiguous | -0.343 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | N |
K/N | 0.8813 | likely_pathogenic | 0.8947 | pathogenic | -2.022 | Highly Destabilizing | 0.896 | D | 0.567 | neutral | N | 0.499503292 | None | None | N |
K/P | 0.9958 | likely_pathogenic | 0.9971 | pathogenic | -0.37 | Destabilizing | 0.996 | D | 0.667 | neutral | None | None | None | None | N |
K/Q | 0.2484 | likely_benign | 0.2637 | benign | -1.6 | Destabilizing | 0.896 | D | 0.585 | neutral | N | 0.472229913 | None | None | N |
K/R | 0.074 | likely_benign | 0.0716 | benign | -1.315 | Destabilizing | 0.011 | N | 0.263 | neutral | N | 0.305224039 | None | None | N |
K/S | 0.7317 | likely_pathogenic | 0.7554 | pathogenic | -2.426 | Highly Destabilizing | 0.919 | D | 0.627 | neutral | None | None | None | None | N |
K/T | 0.5118 | ambiguous | 0.5961 | pathogenic | -1.888 | Destabilizing | 0.946 | D | 0.606 | neutral | N | 0.470662552 | None | None | N |
K/V | 0.6704 | likely_pathogenic | 0.7402 | pathogenic | -0.37 | Destabilizing | 0.988 | D | 0.655 | neutral | None | None | None | None | N |
K/W | 0.9212 | likely_pathogenic | 0.9359 | pathogenic | -0.626 | Destabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
K/Y | 0.8435 | likely_pathogenic | 0.8678 | pathogenic | -0.26 | Destabilizing | 0.996 | D | 0.767 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.