Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1613248619;48620;48621 chr2:178615707;178615706;178615705chr2:179480434;179480433;179480432
N2AB1449143696;43697;43698 chr2:178615707;178615706;178615705chr2:179480434;179480433;179480432
N2A1356440915;40916;40917 chr2:178615707;178615706;178615705chr2:179480434;179480433;179480432
N2B706721424;21425;21426 chr2:178615707;178615706;178615705chr2:179480434;179480433;179480432
Novex-1719221799;21800;21801 chr2:178615707;178615706;178615705chr2:179480434;179480433;179480432
Novex-2725922000;22001;22002 chr2:178615707;178615706;178615705chr2:179480434;179480433;179480432
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: CGT
  • RefSeq wild type template codon: GCA
  • Domain: Fn3-4
  • Domain position: 78
  • Structural Position: 111
  • Q(SASA): 0.3759
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/C rs2303830 -1.403 None N 0.355 0.111 None gnomAD-2.1.1 1.60964E-04 None None None None N None 8.28E-05 2.83E-05 None 0 1.75547E-03 None 0 None 1.19923E-04 7.83E-06 5.62905E-04
R/C rs2303830 -1.403 None N 0.355 0.111 None gnomAD-3.1.2 2.43674E-04 None None None None N None 7.25E-05 0 0 0 6.04053E-03 None 9.43E-05 0 2.95E-05 0 0
R/C rs2303830 -1.403 None N 0.355 0.111 None 1000 genomes 5.99042E-04 None None None None N None 0 0 None None 3E-03 0 None None None 0 None
R/C rs2303830 -1.403 None N 0.355 0.111 None gnomAD-4.0.0 3.15067E-04 None None None None N None 5.34174E-05 0 None 0 1.08229E-02 None 9.37559E-05 0 5.0894E-06 0 1.28197E-04
R/H rs397517593 -1.778 0.877 N 0.517 0.217 0.252162846088 gnomAD-2.1.1 5.37E-05 None None None None N None 8.28E-05 1.41667E-04 None 0 5.16E-05 None 9.81E-05 None 0 3.13E-05 0
R/H rs397517593 -1.778 0.877 N 0.517 0.217 0.252162846088 gnomAD-3.1.2 1.98E-05 None None None None N None 4.83E-05 0 0 0 0 None 0 0 1.47E-05 0 0
R/H rs397517593 -1.778 0.877 N 0.517 0.217 0.252162846088 gnomAD-4.0.0 5.21002E-05 None None None None N None 2.40674E-04 1.00177E-04 None 0 2.23484E-05 None 0 8.24266E-04 2.20538E-05 2.30739E-04 1.12208E-04

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.3799 ambiguous 0.4839 ambiguous -1.589 Destabilizing 0.007 N 0.213 neutral None None None None N
R/C 0.0977 likely_benign 0.1305 benign -1.775 Destabilizing None N 0.355 neutral N 0.410106538 None None N
R/D 0.7872 likely_pathogenic 0.8579 pathogenic -0.825 Destabilizing 0.325 N 0.557 neutral None None None None N
R/E 0.3608 ambiguous 0.417 ambiguous -0.668 Destabilizing 0.325 N 0.43 neutral None None None None N
R/F 0.4243 ambiguous 0.5277 ambiguous -1.302 Destabilizing 0.356 N 0.586 neutral None None None None N
R/G 0.3423 ambiguous 0.4362 ambiguous -1.902 Destabilizing 0.13 N 0.502 neutral N 0.481328932 None None N
R/H 0.1135 likely_benign 0.1436 benign -1.824 Destabilizing 0.877 D 0.517 neutral N 0.433604177 None None N
R/I 0.1843 likely_benign 0.2201 benign -0.714 Destabilizing None N 0.352 neutral None None None None N
R/K 0.1006 likely_benign 0.1176 benign -1.511 Destabilizing 0.061 N 0.377 neutral None None None None N
R/L 0.215 likely_benign 0.2804 benign -0.714 Destabilizing 0.013 N 0.262 neutral N 0.459103579 None None N
R/M 0.2214 likely_benign 0.2776 benign -1.048 Destabilizing 0.356 N 0.531 neutral None None None None N
R/N 0.596 likely_pathogenic 0.705 pathogenic -1.17 Destabilizing 0.136 N 0.471 neutral None None None None N
R/P 0.9528 likely_pathogenic 0.9636 pathogenic -0.99 Destabilizing 0.764 D 0.595 neutral N 0.469911025 None None N
R/Q 0.0885 likely_benign 0.1071 benign -1.265 Destabilizing 0.325 N 0.506 neutral None None None None N
R/S 0.4295 ambiguous 0.5393 ambiguous -2.039 Highly Destabilizing 0.058 N 0.409 neutral N 0.46577769 None None N
R/T 0.1957 likely_benign 0.2531 benign -1.689 Destabilizing 0.031 N 0.408 neutral None None None None N
R/V 0.211 likely_benign 0.2571 benign -0.99 Destabilizing 0.007 N 0.285 neutral None None None None N
R/W 0.1765 likely_benign 0.2237 benign -0.863 Destabilizing 0.864 D 0.519 neutral None None None None N
R/Y 0.2936 likely_benign 0.3856 ambiguous -0.589 Destabilizing 0.628 D 0.581 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.