Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16141 | 48646;48647;48648 | chr2:178615680;178615679;178615678 | chr2:179480407;179480406;179480405 |
N2AB | 14500 | 43723;43724;43725 | chr2:178615680;178615679;178615678 | chr2:179480407;179480406;179480405 |
N2A | 13573 | 40942;40943;40944 | chr2:178615680;178615679;178615678 | chr2:179480407;179480406;179480405 |
N2B | 7076 | 21451;21452;21453 | chr2:178615680;178615679;178615678 | chr2:179480407;179480406;179480405 |
Novex-1 | 7201 | 21826;21827;21828 | chr2:178615680;178615679;178615678 | chr2:179480407;179480406;179480405 |
Novex-2 | 7268 | 22027;22028;22029 | chr2:178615680;178615679;178615678 | chr2:179480407;179480406;179480405 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.998 | N | 0.68 | 0.339 | 0.475192790171 | gnomAD-4.0.0 | 2.7388E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.60022E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4457 | ambiguous | 0.43 | ambiguous | -0.993 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
A/D | 0.729 | likely_pathogenic | 0.7104 | pathogenic | -1.932 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
A/E | 0.6747 | likely_pathogenic | 0.6706 | pathogenic | -1.857 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | D | 0.638596672 | None | None | N |
A/F | 0.5888 | likely_pathogenic | 0.5984 | pathogenic | -0.913 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
A/G | 0.2248 | likely_benign | 0.2293 | benign | -1.481 | Destabilizing | 0.996 | D | 0.654 | neutral | N | 0.519650353 | None | None | N |
A/H | 0.7819 | likely_pathogenic | 0.7836 | pathogenic | -1.842 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
A/I | 0.3743 | ambiguous | 0.3691 | ambiguous | -0.207 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
A/K | 0.8007 | likely_pathogenic | 0.8083 | pathogenic | -1.467 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
A/L | 0.3724 | ambiguous | 0.3684 | ambiguous | -0.207 | Destabilizing | 0.998 | D | 0.679 | prob.neutral | None | None | None | None | N |
A/M | 0.4111 | ambiguous | 0.4164 | ambiguous | -0.21 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
A/N | 0.633 | likely_pathogenic | 0.6245 | pathogenic | -1.369 | Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
A/P | 0.9475 | likely_pathogenic | 0.942 | pathogenic | -0.467 | Destabilizing | 1.0 | D | 0.745 | deleterious | D | 0.602989408 | None | None | N |
A/Q | 0.6643 | likely_pathogenic | 0.6554 | pathogenic | -1.382 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
A/R | 0.6884 | likely_pathogenic | 0.6941 | pathogenic | -1.271 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
A/S | 0.1266 | likely_benign | 0.1262 | benign | -1.729 | Destabilizing | 0.957 | D | 0.432 | neutral | N | 0.452270806 | None | None | N |
A/T | 0.1217 | likely_benign | 0.1291 | benign | -1.555 | Destabilizing | 0.996 | D | 0.676 | prob.neutral | N | 0.515899743 | None | None | N |
A/V | 0.1743 | likely_benign | 0.1745 | benign | -0.467 | Destabilizing | 0.998 | D | 0.68 | prob.neutral | N | 0.494273535 | None | None | N |
A/W | 0.9279 | likely_pathogenic | 0.9237 | pathogenic | -1.5 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
A/Y | 0.7487 | likely_pathogenic | 0.7444 | pathogenic | -1.023 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.