Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16150 | 48673;48674;48675 | chr2:178615653;178615652;178615651 | chr2:179480380;179480379;179480378 |
N2AB | 14509 | 43750;43751;43752 | chr2:178615653;178615652;178615651 | chr2:179480380;179480379;179480378 |
N2A | 13582 | 40969;40970;40971 | chr2:178615653;178615652;178615651 | chr2:179480380;179480379;179480378 |
N2B | 7085 | 21478;21479;21480 | chr2:178615653;178615652;178615651 | chr2:179480380;179480379;179480378 |
Novex-1 | 7210 | 21853;21854;21855 | chr2:178615653;178615652;178615651 | chr2:179480380;179480379;179480378 |
Novex-2 | 7277 | 22054;22055;22056 | chr2:178615653;178615652;178615651 | chr2:179480380;179480379;179480378 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 0.657 | N | 0.531 | 0.322 | 0.450343601259 | gnomAD-4.0.0 | 6.84768E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00075E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0895 | likely_benign | 0.1007 | benign | -0.451 | Destabilizing | 0.012 | N | 0.228 | neutral | N | 0.470177862 | None | None | N |
S/C | 0.1501 | likely_benign | 0.171 | benign | -0.315 | Destabilizing | 0.993 | D | 0.615 | neutral | None | None | None | None | N |
S/D | 0.5803 | likely_pathogenic | 0.5683 | pathogenic | -0.182 | Destabilizing | 0.911 | D | 0.623 | neutral | None | None | None | None | N |
S/E | 0.6624 | likely_pathogenic | 0.6414 | pathogenic | -0.258 | Destabilizing | 0.835 | D | 0.626 | neutral | None | None | None | None | N |
S/F | 0.3023 | likely_benign | 0.3419 | ambiguous | -0.878 | Destabilizing | 0.973 | D | 0.736 | deleterious | None | None | None | None | N |
S/G | 0.1237 | likely_benign | 0.1445 | benign | -0.61 | Destabilizing | 0.717 | D | 0.418 | neutral | None | None | None | None | N |
S/H | 0.4924 | ambiguous | 0.5155 | ambiguous | -1.182 | Destabilizing | 0.998 | D | 0.603 | neutral | None | None | None | None | N |
S/I | 0.2498 | likely_benign | 0.2883 | benign | -0.156 | Destabilizing | 0.947 | D | 0.739 | deleterious | None | None | None | None | N |
S/K | 0.8145 | likely_pathogenic | 0.8066 | pathogenic | -0.721 | Destabilizing | 0.835 | D | 0.616 | neutral | None | None | None | None | N |
S/L | 0.1307 | likely_benign | 0.1504 | benign | -0.156 | Destabilizing | 0.657 | D | 0.531 | neutral | N | 0.470830879 | None | None | N |
S/M | 0.219 | likely_benign | 0.2574 | benign | 0.147 | Stabilizing | 0.998 | D | 0.597 | neutral | None | None | None | None | N |
S/N | 0.1841 | likely_benign | 0.2131 | benign | -0.426 | Destabilizing | 0.973 | D | 0.639 | neutral | None | None | None | None | N |
S/P | 0.5977 | likely_pathogenic | 0.6155 | pathogenic | -0.224 | Destabilizing | 0.964 | D | 0.637 | neutral | N | 0.471981797 | None | None | N |
S/Q | 0.5835 | likely_pathogenic | 0.5921 | pathogenic | -0.687 | Destabilizing | 0.973 | D | 0.635 | neutral | None | None | None | None | N |
S/R | 0.7639 | likely_pathogenic | 0.7483 | pathogenic | -0.51 | Destabilizing | 0.973 | D | 0.649 | prob.neutral | None | None | None | None | N |
S/T | 0.0959 | likely_benign | 0.1114 | benign | -0.484 | Destabilizing | 0.792 | D | 0.433 | neutral | N | 0.457716442 | None | None | N |
S/V | 0.2175 | likely_benign | 0.2538 | benign | -0.224 | Destabilizing | 0.899 | D | 0.547 | neutral | None | None | None | None | N |
S/W | 0.4868 | ambiguous | 0.4938 | ambiguous | -0.869 | Destabilizing | 0.998 | D | 0.679 | prob.neutral | None | None | None | None | N |
S/Y | 0.3058 | likely_benign | 0.3176 | benign | -0.617 | Destabilizing | 0.991 | D | 0.719 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.