Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16151 | 48676;48677;48678 | chr2:178615650;178615649;178615648 | chr2:179480377;179480376;179480375 |
N2AB | 14510 | 43753;43754;43755 | chr2:178615650;178615649;178615648 | chr2:179480377;179480376;179480375 |
N2A | 13583 | 40972;40973;40974 | chr2:178615650;178615649;178615648 | chr2:179480377;179480376;179480375 |
N2B | 7086 | 21481;21482;21483 | chr2:178615650;178615649;178615648 | chr2:179480377;179480376;179480375 |
Novex-1 | 7211 | 21856;21857;21858 | chr2:178615650;178615649;178615648 | chr2:179480377;179480376;179480375 |
Novex-2 | 7278 | 22057;22058;22059 | chr2:178615650;178615649;178615648 | chr2:179480377;179480376;179480375 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs186497293 | 0.115 | None | N | 0.03 | 0.159 | None | gnomAD-2.1.1 | 2.64832E-04 | None | None | None | None | N | None | 2.52588E-03 | 1.70116E-04 | None | 0 | 1.54242E-04 | None | 0 | None | 0 | 2.35E-05 | 1.40726E-04 |
T/A | rs186497293 | 0.115 | None | N | 0.03 | 0.159 | None | gnomAD-3.1.2 | 6.71866E-04 | None | None | None | None | N | None | 2.27174E-03 | 3.94115E-04 | 0 | 0 | 1.95542E-04 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/A | rs186497293 | 0.115 | None | N | 0.03 | 0.159 | None | 1000 genomes | 1.19808E-03 | None | None | None | None | N | None | 3.8E-03 | 1.4E-03 | None | None | 0 | 0 | None | None | None | 0 | None |
T/A | rs186497293 | 0.115 | None | N | 0.03 | 0.159 | None | gnomAD-4.0.0 | 1.32734E-04 | None | None | None | None | N | None | 2.33726E-03 | 2.50392E-04 | None | 0 | 6.70211E-05 | None | 0 | 0 | 8.48243E-06 | 0 | 1.76299E-04 |
T/N | rs1188604829 | None | 0.011 | N | 0.178 | 0.126 | 0.339793275041 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/N | rs1188604829 | None | 0.011 | N | 0.178 | 0.126 | 0.339793275041 | gnomAD-4.0.0 | 6.58285E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47232E-05 | 0 | 0 |
T/P | rs186497293 | 0.035 | 0.026 | N | 0.339 | 0.089 | 0.348324211639 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 6.48E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
T/P | rs186497293 | 0.035 | 0.026 | N | 0.339 | 0.089 | 0.348324211639 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 9.67E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/P | rs186497293 | 0.035 | 0.026 | N | 0.339 | 0.089 | 0.348324211639 | gnomAD-4.0.0 | 4.96239E-06 | None | None | None | None | N | None | 6.68878E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54471E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0536 | likely_benign | 0.0517 | benign | -0.249 | Destabilizing | None | N | 0.03 | neutral | N | 0.503995291 | None | None | N |
T/C | 0.2653 | likely_benign | 0.316 | benign | -0.569 | Destabilizing | 0.204 | N | 0.231 | neutral | None | None | None | None | N |
T/D | 0.297 | likely_benign | 0.2654 | benign | -0.233 | Destabilizing | 0.015 | N | 0.229 | neutral | None | None | None | None | N |
T/E | 0.2515 | likely_benign | 0.2278 | benign | -0.324 | Destabilizing | 0.015 | N | 0.191 | neutral | None | None | None | None | N |
T/F | 0.1573 | likely_benign | 0.1907 | benign | -0.936 | Destabilizing | 0.035 | N | 0.395 | neutral | None | None | None | None | N |
T/G | 0.151 | likely_benign | 0.1695 | benign | -0.265 | Destabilizing | 0.003 | N | 0.189 | neutral | None | None | None | None | N |
T/H | 0.2156 | likely_benign | 0.2302 | benign | -0.356 | Destabilizing | 0.439 | N | 0.29 | neutral | None | None | None | None | N |
T/I | 0.0868 | likely_benign | 0.1105 | benign | -0.318 | Destabilizing | None | N | 0.087 | neutral | D | 0.551599501 | None | None | N |
T/K | 0.2498 | likely_benign | 0.2319 | benign | -0.436 | Destabilizing | 0.015 | N | 0.259 | neutral | None | None | None | None | N |
T/L | 0.0653 | likely_benign | 0.0774 | benign | -0.318 | Destabilizing | 0.003 | N | 0.178 | neutral | None | None | None | None | N |
T/M | 0.0718 | likely_benign | 0.081 | benign | -0.356 | Destabilizing | 0.112 | N | 0.237 | neutral | None | None | None | None | N |
T/N | 0.0953 | likely_benign | 0.0976 | benign | -0.274 | Destabilizing | 0.011 | N | 0.178 | neutral | N | 0.505229062 | None | None | N |
T/P | 0.0933 | likely_benign | 0.1064 | benign | -0.276 | Destabilizing | 0.026 | N | 0.339 | neutral | N | 0.505024382 | None | None | N |
T/Q | 0.1972 | likely_benign | 0.2063 | benign | -0.454 | Destabilizing | 0.068 | N | 0.357 | neutral | None | None | None | None | N |
T/R | 0.2456 | likely_benign | 0.2304 | benign | -0.166 | Destabilizing | 0.035 | N | 0.395 | neutral | None | None | None | None | N |
T/S | 0.075 | likely_benign | 0.0767 | benign | -0.424 | Destabilizing | None | N | 0.039 | neutral | N | 0.492045142 | None | None | N |
T/V | 0.0712 | likely_benign | 0.0829 | benign | -0.276 | Destabilizing | 0.003 | N | 0.116 | neutral | None | None | None | None | N |
T/W | 0.5117 | ambiguous | 0.5446 | ambiguous | -1.037 | Destabilizing | 0.747 | D | 0.284 | neutral | None | None | None | None | N |
T/Y | 0.205 | likely_benign | 0.2251 | benign | -0.732 | Destabilizing | 0.204 | N | 0.393 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.