Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 16161 | 48706;48707;48708 | chr2:178615464;178615463;178615462 | chr2:179480191;179480190;179480189 |
N2AB | 14520 | 43783;43784;43785 | chr2:178615464;178615463;178615462 | chr2:179480191;179480190;179480189 |
N2A | 13593 | 41002;41003;41004 | chr2:178615464;178615463;178615462 | chr2:179480191;179480190;179480189 |
N2B | 7096 | 21511;21512;21513 | chr2:178615464;178615463;178615462 | chr2:179480191;179480190;179480189 |
Novex-1 | 7221 | 21886;21887;21888 | chr2:178615464;178615463;178615462 | chr2:179480191;179480190;179480189 |
Novex-2 | 7288 | 22087;22088;22089 | chr2:178615464;178615463;178615462 | chr2:179480191;179480190;179480189 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs755404483 | 0.27 | 0.999 | N | 0.581 | 0.449 | 0.318828661733 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/S | rs755404483 | 0.27 | 0.999 | N | 0.581 | 0.449 | 0.318828661733 | gnomAD-4.0.0 | 1.59481E-06 | None | None | None | None | N | None | 0 | 2.28917E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4908 | ambiguous | 0.4802 | ambiguous | -0.302 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | N |
N/C | 0.6011 | likely_pathogenic | 0.6161 | pathogenic | 0.34 | Stabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
N/D | 0.3474 | ambiguous | 0.3107 | benign | -0.005 | Destabilizing | 0.999 | D | 0.618 | neutral | N | 0.48483599 | None | None | N |
N/E | 0.7068 | likely_pathogenic | 0.6722 | pathogenic | -0.039 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
N/F | 0.7521 | likely_pathogenic | 0.7571 | pathogenic | -0.615 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
N/G | 0.502 | ambiguous | 0.5058 | ambiguous | -0.484 | Destabilizing | 0.999 | D | 0.578 | neutral | None | None | None | None | N |
N/H | 0.2353 | likely_benign | 0.2349 | benign | -0.499 | Destabilizing | 1.0 | D | 0.627 | neutral | D | 0.583296942 | None | None | N |
N/I | 0.6165 | likely_pathogenic | 0.5848 | pathogenic | 0.089 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | D | 0.641439004 | None | None | N |
N/K | 0.5717 | likely_pathogenic | 0.5274 | ambiguous | 0.012 | Stabilizing | 1.0 | D | 0.702 | prob.neutral | N | 0.517607626 | None | None | N |
N/L | 0.6008 | likely_pathogenic | 0.5861 | pathogenic | 0.089 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
N/M | 0.579 | likely_pathogenic | 0.567 | pathogenic | 0.413 | Stabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | N |
N/P | 0.9796 | likely_pathogenic | 0.9622 | pathogenic | -0.014 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
N/Q | 0.5724 | likely_pathogenic | 0.5676 | pathogenic | -0.414 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
N/R | 0.6418 | likely_pathogenic | 0.5978 | pathogenic | 0.086 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
N/S | 0.2535 | likely_benign | 0.2529 | benign | -0.17 | Destabilizing | 0.999 | D | 0.581 | neutral | N | 0.482384889 | None | None | N |
N/T | 0.3868 | ambiguous | 0.3574 | ambiguous | -0.067 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | N | 0.509160026 | None | None | N |
N/V | 0.5818 | likely_pathogenic | 0.5635 | ambiguous | -0.014 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
N/W | 0.9356 | likely_pathogenic | 0.9299 | pathogenic | -0.595 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
N/Y | 0.3189 | likely_benign | 0.3151 | benign | -0.343 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | D | 0.731133598 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.